[Bioc-devel] pre-receive hook declined

[Clay Wright]

Well at least it’s an embarrassingly easy fix!

Thanks all for the responses.


On Tue, Jul 27, 2021 at 8:06 PM Vincent Carey <stvjc using channing.harvard.edu>
wrote:

> hi you can't update 3.12  3.x is frozen when 3.(x+1) becomes release
> perhaps the error message can be clarified
>
> On Tue, Jul 27, 2021 at 3:44 PM Clay Wright <wright.clay using gmail.com> wrote:
>
>> Hi,
>>
>> I am now encountering the following similar error trying to push a bugfix
>> to my package. Does my account also need a similar update to Victor and
>> Mike? Or is this something on my end? I just finally updated my github
>> personal access tokens, maybe that's the issue? I haven't tried a fresh
>> clone of the repository yet.
>>
>>
>> git push origin RELEASE_3_12
>>
>> Enumerating objects: 17, done.
>> Counting objects: 100% (17/17), done.
>> Delta compression using up to 4 threads
>> Compressing objects: 100% (12/12), done.
>> Writing objects: 100% (12/12), 1.48 KiB | 151.00 KiB/s, done.
>> Total 12 (delta 9), reused 0 (delta 0), pack-reused 0
>> remote: FATAL: W refs/heads/RELEASE_3_12 packages/flowTime r.wright DENIED
>> by fallthru
>> remote: error: hook declined to update refs/heads/RELEASE_3_12
>> To git.bioconductor.org:packages/flowTime.git
>>  ! [remote rejected] RELEASE_3_12 -> RELEASE_3_12 (hook declined)
>> error: failed to push some refs to 'git.bioconductor.org:
>> packages/flowTime.git'
>>
>>
>> Thanks!
>> Clay
>>
>>
>> On Fri, Jul 2, 2021 at 1:30 PM Victor Yuan <victor.2wy using gmail.com> wrote:
>>
>> > It works for me as well now. Thanks!
>> >
>> > On Thu, Jul 1, 2021 at 8:21 AM Michael Love <
>> michaelisaiahlove using gmail.com>
>> > wrote:
>> >
>> > > That works for me. Thanks.
>> > >
>> > > Mike
>> > >
>> > > On Thu, Jul 1, 2021 at 2:07 PM Nitesh Turaga <nturaga.bioc using gmail.com>
>> > > wrote:
>> > > >
>> > > > Hi
>> > > >
>> > > > Please try again. You should not see this error anymore.
>> > > >
>> > > > This was a mistake on our end.
>> > > >
>> > > > Best,
>> > > >
>> > > > Nitesh
>> > > >
>> > > >
>> > > >
>> > > > Nitesh Turaga
>> > > > Scientist II, Department of Data Science,
>> > > > Bioconductor Core Team Member
>> > > > Dana Farber Cancer Institute
>> > > >
>> > > > > On Jul 1, 2021, at 1:49 AM, Michael Love <
>> > michaelisaiahlove using gmail.com>
>> > > wrote:
>> > > > >
>> > > > > I'm getting a similar error, trying to push commits for a new
>> package
>> > > > > submission. So this is my first attempt to push to Bioc git
>> servers
>> > > > > for this package.
>> > > > >
>> > > > > After following instructions from
>> > > > >
>> https://bioconductor.org/developers/how-to/git/new-package-workflow/
>> > > > > ...
>> > > > >
>> > > > > spatialDmelxsim git:(main) > git push upstream main:master
>> > > > > Enumerating objects: 20, done.
>> > > > > Counting objects: 100% (20/20), done.
>> > > > > Delta compression using up to 8 threads
>> > > > > Compressing objects: 100% (10/10), done.
>> > > > > Writing objects: 100% (12/12), 1.60 KiB | 1.60 MiB/s, done.
>> > > > > Total 12 (delta 5), reused 0 (delta 0), pack-reused 0
>> > > > > remote: Traceback (most recent call last):
>> > > > > remote:   File
>> > > "hooks/pre-receive.h00-pre-receive-hook-dataexp-workflow",
>> > > > > line 90, in <module>
>> > > > > remote:     apply_hooks(hooks_dict)
>> > > > > remote:   File
>> > > "hooks/pre-receive.h00-pre-receive-hook-dataexp-workflow",
>> > > > > line 72, in apply_hooks
>> > > > > remote:     if hooks_dict["pre-receive-hook-merge-markers"]:  #
>> > enable
>> > > hook
>> > > > > remote: KeyError: 'pre-receive-hook-merge-markers'
>> > > > > To git.bioconductor.org:packages/spatialDmelxsim
>> > > > > ! [remote rejected] main -> master (pre-receive hook declined)
>> > > > > error: failed to push some refs to
>> > > > > 'git.bioconductor.org:packages/spatialDmelxsim'
>> > > >
>> > >
>> >
>> >         [[alternative HTML version deleted]]
>> >
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>> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
>> >
>>
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>>
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