[Bioc-devel] Fwd: Bioconductor package EnMCB

[Lluís Revilla]

Hi Xin Yu,

You seem to be using the symbol ≤ somewhere on the documentation,
looking at the repository on GitHub I only found that symbol on two
comments:
https://github.com/whirlsyu/EnMCB/blob/6124a5a237a94d42d935720dc1bf8a44b11f6966/R/metricMCB.R#L239
https://github.com/whirlsyu/EnMCB/blob/6124a5a237a94d42d935720dc1bf8a44b11f6966/R/metricMCB_cv.R#L124
Not sure if this is the right repository or if it is up to date. But
there they shouldn't cause this warning, you might have moved those
comments to a help page.
You probably should replace them by the corresponding unicode encoding.
Hope this helps,

Lluís


On Mon, 28 Dec 2020 at 19:56, xin wwa <whirlsyu using gmail.com> wrote:
>
> Dear bioconductor team,
> I am working on our package EnMCB, which recently have some problems on
> developing branch,
> I fixed most of the errors but our package still has a warning in check as
> follows:
>
> * checking PDF version of manual ... WARNING
> LaTeX errors when creating PDF version.
> This typically indicates Rd problems.
>
> LaTeX errors when creating PDF version.
> This typically indicates Rd problems.
> LaTeX errors found:
> ! Package inputenc Error: Unicode character ≤ (U+2264)
> (inputenc)                not set up for use with LaTeX.
>
> See the inputenc package documentation for explanation.
> Type  H <return>  for immediate help.
> ! Package inputenc Error: Unicode character ≤ (U+2264)
> (inputenc)                not set up for use with LaTeX.
>
> See the inputenc package documentation for explanation.
> Type  H <return>  for immediate help.
> * checking PDF version of manual without hyperrefs or index ... ERROR
> * DONE
>
> I checked our package on the local computer and looks fine. I can not find
> out which character causes this problem.
>
> Could you please help me to fix this issue?
>
> Thanks in advance.
> Merry Christmas!
> Best Regards,
> Xin Yu
> Ph.D. student of Biomedical Informatics
> College of Bioinformatics - Huazhong Agricultural University
> whirlsyu using gmail.com
> yuxin using webmail.hzau.edu.cn
> tel: (+86) 186-5313-5769
>
>
> xin wwa <whirlsyu using gmail.com> 于2020年12月23日周三 下午8:26写道：
>
> > Dear  Lori,
> >
> > Thank you for your email, we currently are working on upgrading our
> > package.
> > It should be work fine after our update.
> >
> > Best regards,
> > Xin Yu
> > Ph.D. student of Biomedical Informatics
> > College of Bioinformatics - Huazhong Agricultural University
> > whirlsyu using gmail.com
> > yuxin using webmail.hzau.edu.cn
> > tel: (+86) 186-5313-5769
> >
> >
> > Kern, Lori <Lori.Shepherd using roswellpark.org> 于2020年12月23日周三 下午8:20写道：
> >
> >> Hello Package Maintainer,
> >>
> >> The Bioconductor Team would like to notify you that your package is
> >> currently
> >> failing on the devel 3.13 version of Bioconductor, and has been for an
> >> extended
> >> period of time.  Please fix your package to R CMD build and R CMD check
> >> cleanly
> >> immediately to avoid deprecation of your package. While devel is a place
> >> to
> >> experiment with new features, we expect packages to build and check
> >> cleanly in a
> >> reasonable time period and not stay broken for any extended period of
> >> time. If
> >> you are having trouble or have any further questions please do not
> >> hesitate to
> >> reach out to the developers mailing list at bioc-devel using r-project.org.
> >> The package has been failing consistently since 12/04/20
> >>
> >> bioconductor.org/checkResults/devel/bioc-LATEST/EnMCB
> >>
> >>
> >> Lori Shepherd
> >>
> >> Bioconductor Core Team
> >>
> >> Roswell Park Comprehensive Cancer Center
> >>
> >> Department of Biostatistics & Bioinformatics
> >>
> >> Elm & Carlton Streets
> >>
> >> Buffalo, New York 14263
> >>
> >> This email message may contain legally privileged and/or confidential
> >> information. If you are not the intended recipient(s), or the employee or
> >> agent responsible for the delivery of this message to the intended
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> >
>
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