[Bioc-devel] MOFA package deprecation

Britta Velten br|tt@@ve|ten @end|ng |rom gm@||@com
Sat Feb 6 10:53:46 CET 2021

Hi Lori,

a quick follow up question on the package depreciation of Mofa which you
took care of a while ago. Would it be possible to also have the pointer to
mofa2 on the landing page of the package instead of only in the startup
message? There it simply reads
"This package is deprecated. It will probably be removed from Bioconductor.”

This has led to some confusion and it would be great to have the pointer to
the new alternative package there.

Thanks and best regards

Kern, Lori <Lori.Shepherd using roswellpark.org> schrieb am Mi., 21. Okt. 2020,

> Thank you for letting us know.  Yes I can specialize the message to point
> users to MOFA2.  I will take care of this later today.
> Does MOFA2 still use the accompanied data package MOFAdata or should that
> also be deprecated?
> Lori Shepherd
> Bioconductor Core Team
> Roswell Park Comprehensive Cancer Center
> Department of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
> ------------------------------
> *From:* Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Britta
> Velten <britta.velten using gmail.com>
> *Sent:* Wednesday, October 21, 2020 7:01 AM
> *To:* bioc-devel using r-project.org <bioc-devel using r-project.org>
> *Subject:* [Bioc-devel] MOFA package deprecation
> Dear Bioconductor core team,
> I would like to deprecate the MOFA package as it has been superseded by
> MOFA2.
> Is it possible to add a note for users to turn to MOFA2 in the deprecation
> warning for MOFA?
> Best,
> Britta
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