[Bioc-devel] Bioconductor Git Credentials error

Fri Apr 2 19:05:34 CEST 2021

Hi Ashish,

I replied to your email yesterday, let�s stick to the same thread there.

From: Ashish Jain <jain using iastate.edu>
Date: Friday, April 2, 2021 at 1:02 PM
To: Nitesh Turaga <nturaga.bioc using gmail.com>
Cc: raman sethi <ramansethi91 using gmail.com>, Chen Jinmiao <Chen_Jinmiao using immunol.a-star.edu.sg>, "bioc-devel using r-project.org" <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Bioconductor Git Credentials error

Hi Nitesh,

I am Ashish Jain, author, and maintainer of the package "TissueEnrich".  I am also facing a similar issue as I am not able to login to the BiocCredentials website. I need to update my package with some fixes. Can you please also look into this?

Regards,
Ashish Jain

On Fri, Apr 2, 2021 at 8:48 AM Nitesh Turaga <nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com>> wrote:
Hi Raman,

You should have access to the package. Please check again.

Best,

Nitesh

From: raman sethi <ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com>>
Date: Friday, April 2, 2021 at 1:38 AM
To: Nitesh Turaga <nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com>>, Chen Jinmiao <Chen_Jinmiao using immunol.a-star.edu.sg<mailto:Chen_Jinmiao using immunol.a-star.edu.sg>>
Subject: Re: [Bioc-devel] Bioconductor Git Credentials error

Hi Nitesh,

We have activated the account using the email ID : ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com><mailto:ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com>> and added SSH keys to the account.

We want to submit the code of the R package cytofkit2 (https://github.com/raman91/cytofkit2) to Bioconductor which was modified from the package : https://github.com/JinmiaoChenLab/cytofkit2

The author of the Package cytofkit (Dr. Chen Jinmiao) is copied in this email as per your request.

Thank you

Best Regards
Raman

On Wed, Mar 31, 2021 at 10:46 PM Nitesh Turaga <nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com><mailto:nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com>>> wrote:
Hi Raman,

I�ve created your own BiocCredentials account for you now.

Email: ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com><mailto:ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com>>

Please activate the account, add your Github username or SSH keys. (https://git.bioconductor.org/BiocCredentials/account_activation)

Once you know which packages you want access to, let me know and please copy on the email the authors of those packages.

You should be accessing these packages with your own SSH keys and Credentials account.

Best,

Nitesh

From: raman sethi <ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com><mailto:ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com>>>
Date: Wednesday, March 31, 2021 at 6:49 AM
To: Nitesh Turaga <nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com><mailto:nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com>>>
Subject: Re: [Bioc-devel] Bioconductor Git Credentials error

Hi Nitesh,

Sorry for the late reply.
I am running gitch fetch --all but i am getting an error message:

git using git.bioconductor.org<mailto:git using git.bioconductor.org><mailto:git using git.bioconductor.org<mailto:git using git.bioconductor.org>>: Permission denied (publickey).
fatal: Could not read from remote repository.

Please make sure you have the correct access rights
and the repository exists.
error: Could not fetch upstream

Can you please tell me how can i solve this problem?

Thank you

Best Regards
Raman

On Mon, Mar 22, 2021 at 8:23 PM Nitesh Turaga <nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com><mailto:nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com>>> wrote:
Hi,

You cannot have two maintainers to a package. We operate under the assumption that there is a single maintainer per package. The user that has access to the package is �j.chen2�., there are no SSH keys with that username so there is no access. I�ve deleted the other account with username �raman..� under the same email as �j.chen2�.

The best way forward is to add keys under j.chen2 and get access to the package.

https://github.com/JinmiaoChenLab/cytofkit2/blob/master/DESCRIPTION#L10

Take a look at this link: http://bioconductor.org/developers/package-guidelines/#description

�Only one person should be listed as the Maintainer to ensure a single point of contact. This person by default will have commit access to the git repository on git.bioconductor.org<http://git.bioconductor.org><http://git.bioconductor.org>. Commit access can be given to other developers by request on the bioc-devel mailing list. Another option is to add collaborators to the github repository. This approach enables development by many but restricts push access to git.bioconductor.org.�

Best,

Nitesh

From: raman sethi <ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com><mailto:ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com>>>
Date: Monday, March 22, 2021 at 2:40 AM
To: Nitesh Turaga <nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com><mailto:nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com>>>
Cc: Bioc-devel <bioc-devel using r-project.org<mailto:bioc-devel using r-project.org><mailto:bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>>>
Subject: Re: [Bioc-devel] Bioconductor Git Credentials error

Hi Nitesh,

Our account is activated already.

Thank you

Best Regards
Raman

On Sat, Mar 20, 2021 at 10:31 PM Nitesh Turaga <nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com><mailto:nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com>>> wrote:
Did you activate your account first?

From: raman sethi <ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com><mailto:ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com>>>
Date: Friday, March 19, 2021 at 10:33 PM
To: Nitesh Turaga <nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com><mailto:nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com>>>
Cc: Bioc-devel <bioc-devel using r-project.org<mailto:bioc-devel using r-project.org><mailto:bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>>>
Subject: Re: [Bioc-devel] Bioconductor Git Credentials error

Hi Nitesh,

I am using the URL : https://git.bioconductor.org/BiocCredentials/login/

Please advise how i can access.

Thank you

Best Regards
Raman

On Sat, Mar 20, 2021 at 10:23 AM Nitesh Turaga <nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com><mailto:nturaga.bioc using gmail.com<mailto:nturaga.bioc using gmail.com>>> wrote:
Hi,

Can you tell us the exact URL you are trying to access?

I'm not able to reproduce it.

Nitesh

On Fri, Mar 19, 2021, 7:39 AM raman sethi <ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com><mailto:ramansethi91 using gmail.com<mailto:ramansethi91 using gmail.com>>> wrote:
Dear Bioconductor Git Credentials Team,

I am trying to log in to Bioconductor Git Credentials as i want to trigger
a new build report for submitting our package 'Cytofkit2' to Bioconductor.

But i am getting an error : Server Error (500)

Please advise me how I can resolve this issue.

Thank you

Best Regards
Raman

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--
Regards,
Ashish Jain
Ph +1-317-529-7973

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