[Bioc-devel] Missing knitcitations package on devel for PharmacoGx

[Eeles, Christopher]

Hello Bioc community,

I am the maintainer for PharmacoGx and have noticed that I have an error on all platforms of the devel branch related to the knitcitations package.


* checking for file �PharmacoGx/DESCRIPTION� ... OK
* preparing �PharmacoGx�:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building �CreatingPharmacoSet.Rmd� using rmarkdown
Quitting from lines 79-82 (CreatingPharmacoSet.Rmd)
Error: processing vignette 'CreatingPharmacoSet.Rmd' failed with diagnostics:
there is no package called 'knitcitations'
--- failed re-building �CreatingPharmacoSet.Rmd�

--- re-building �PharmacoGx.Rmd� using rmarkdown
Quitting from lines 79-82 (PharmacoGx.Rmd)
Error: processing vignette 'PharmacoGx.Rmd' failed with diagnostics:
there is no package called 'knitcitations'
--- failed re-building �PharmacoGx.Rmd�

SUMMARY: processing the following files failed:
  �CreatingPharmacoSet.Rmd� �PharmacoGx.Rmd�

Error: Vignette re-building failed.
Execution halted

The package builds fine on the release branch with the same vignettes and knitcitations in the suggests field of the description.

Any advice on how I can fix this? It seems like my suggests aren't being installed on the devel branch.

Thanks for your assistance.

Best,
Christopher Eeles
Software Developer
Benjamin Haibe-Kains Lab
Princess Margaret Cancer Centre

This e-mail may contain confidential and/or privileged i...{{dropped:22}}