[Bioc-devel] The new version of the package 'cbaf' is not downloadable for BioC 3.11

[Lluís Revilla]

Hi,

The maintainer is already aware of this error.
I reported it several months ago
https://github.com/colearendt/xlsx/issues/132 and is reported multiple
times (issues 154, 156, 159)
There is a fix on the github version of the package but the maintainter
hasn't updated the CRAN version yet.

Maybe if you present your case xlsx will be finally updated on CRAN.

Cheers,

Lluís

On Tue, 12 May 2020 at 23:44, Hervé Pagès <hpages using fredhutch.org> wrote:

> Hi Arman,
>
> On 5/7/20 08:57, Arman Shahrisa wrote:
> > Hi to all,
> >
> > I�m maintainer of the package  �cbaf�. I have pushed changes to both
> devel and stable branches almost two days ago. The package check has only
> been carried out for the stable release so far. There has been only one
> error on macOS server as a result of the version of Java used on the server.
>
> Not sure what is wrong with the version of Java used on our Mac server
> machv2. cbaf fails to load with the following error message:
>
>    Error: .onLoad failed in loadNamespace() for 'xlsx', details:
>      call: fun(libname, pkgname)
>      error: Your java version is 14.  Need 1.5.0 or higher.
>    Execution halted
>    ERROR: lazy loading failed for package ‘cbaf’
>
> Obviously version 14 is higher than version 1.5.0 so to me it just looks
> like the Java checking code in xlsx is broken. Something you might want
> to report to the xlsx maintainer.
>
> Alternatively you might want to choose the packages you depend on more
> carefully.
>
> Cheers,
> H.
>
>
> > Despite this, the older version is listed on the cbaf web page for BioC
> 3.11.
> >
> >
> https://urldefense.proofpoint.com/v2/url?u=https-3A__bioconductor.org_packages_release_bioc_html_cbaf.html&d=DwIFaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=A59d3JuLgSK3niLkKLga7vyA-vcQsy8q7riknf75RJ0&s=UAhMnh0UmS_h5m4zNRZ_6GE4yemBR0PNGc1WWIARybI&e=
> >
> > Am I missing something?
> >
> > Best regards,
> > Arman
> >
> >
> >       [[alternative HTML version deleted]]
> >
> >
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> >
>
> --
> Hervé Pagès
>
> Program in Computational Biology
> Division of Public Health Sciences
> Fred Hutchinson Cancer Research Center
> 1100 Fairview Ave. N, M1-B514
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> Seattle, WA 98109-1024
>
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>
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