[Bioc-devel] Trying to access the source repository of a bioconductor package (Developer Access)

[Enio Gjerga]

Hi,

Thank you for your reply. So according to #14:

1. I use "git remote -v" and then I get the following:

origin https://github.com/saezlab/CNOv2.git (fetch)

origin https://github.com/saezlab/CNOv2.git (push)

upstream git using git.bioconductor.org:packages/CNORfeeder.git (fetch)

upstream git using git.bioconductor.org:packages/CNORfeeder.git (push)

2. Then I check if I have access to the git serve by using "ssh -T
git using git.bioconductor.org" after which I get:

Permission denied (publickey).

3. According to #15, I have generated another key under the name
id_rsa_bioc through the commands:

mkdir -p ~/.ssh && chmod 700 ~/.ssh

touch ~/.ssh/config

chmod 600 ~/.ssh/config

But it doesn't seem to generate anny ssh/config directory so was wondering
how can I add the:

host git.bioconductor.org
     HostName git.bioconductor.org
     IdentityFile ~/.ssh/id_rsa_bioconductor
     User git

The public key of id_rsa_bioc is already added on my profile in
BiocCredentials and also on my GitHub account.

As always any help is very much appreciated.

Cheers,
Enio

On Fri, 27 Mar 2020 at 16:03, Turaga, Nitesh <Nitesh.Turaga using roswellpark.org>
wrote:

> As given in #14 of the FAQ, please send me
>
>         git remote -v
>
>
>
>
> > On Mar 27, 2020, at 10:54 AM, Enio Gjerga <enio.gjerga using gmail.com> wrote:
> >
> > Hello,
> >
> > Thank you very much for your reply. I have added a new key on my
> BiocCredentials and on Github, however, I am afraid that the same issue
> still persists. If I try to check whether I have access to the package
> (using the "ssh -T git using git.bioconductor.org" command) or clone it locally
> (through "git clone git using git.bioconductor.org:packages/CNORfeeder"
> command) I still unfortunately get the same "permission denied (public
> key)" error.
> >
> > How can I check for my git set up?
> >
> > Sorry again, but quiet new on this.
> >
> > Cheers,
> >
> > On Fri, 27 Mar 2020 at 13:38, Turaga, Nitesh <
> Nitesh.Turaga using roswellpark.org> wrote:
> > Try adding another key. If that doesn't work, show us your git set up.
> >
> > http://bioconductor.org/developers/how-to/git/faq/
> >
> > #13 and #14
> >
> > Best,
> >
> > Nitesh
> >
> >
> > On 3/27/20, 6:15 AM, "Bioc-devel on behalf of Enio Gjerga" <
> bioc-devel-bounces using r-project.org on behalf of enio.gjerga using gmail.com>
> wrote:
> >
> >     Hello,
> >
> >     I am Enio Gjerga and I am the maintainer of the CNORfeeder and the
> CNORode
> >     package, a role which I got recently. I am facing trouble trying to
> access
> >     the source packages for then later syncing it with a Github
> repository and
> >     do a few necessary updates. I try first to obtain developer access
> through
> >     the "git clone git using git.bioconductor.org:packages/CNORfeeder"
> command, but
> >     then I get the error "Permission denied (publickey). fatal: Could
> not read
> >     from remote repository.". I already have the GitHub id and the
> ssh-rsa key
> >     on my user profile in https://git.bioconductor.org/BiocCredentials,
> but
> >     apparently I still can't get the access to the package and not sure
> what
> >     might be doing wrong.
> >
> >     Any help about this would be much appreciated.
> >
> >     Cheers,
> >
> >     Enio
> >
> >     --
> >     Enio GJERGA
> >     PhD student
> >     JRC-COMBINE RWTH Aachen
> >     Tel : +4917685132057
> >
> >         [[alternative HTML version deleted]]
> >
> >     _______________________________________________
> >     Bioc-devel using r-project.org mailing list
> >     https://stat.ethz.ch/mailman/listinfo/bioc-devel
> >
> >
> >
> >
> > This email message may contain legally privileged and/or confidential
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> >
> > --
> > Enio GJERGA
> > PhD student
> > JRC-COMBINE RWTH Aachen
> > Tel : +4917685132057
> >
>
>
>
> This email message may contain legally privileged and/or confidential
> information.  If you are not the intended recipient(s), or the employee or
> agent responsible for the delivery of this message to the intended
> recipient(s), you are hereby notified that any disclosure, copying,
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-- 
Enio GJERGA
PhD student
JRC-COMBINE RWTH Aachen
Tel : +4917685132057

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