[Bioc-devel] Fwd: 'MBQN' Bioconductor package

Shepherd, Lori Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Thu Mar 26 19:53:32 CET 2020

I see changes pushed to the RELEASE_3_10 branch from today.   Please see the top section of this documentation that describes timing and expected changes.

It will take 24-48 hours to appear on the build report and landing pages.  It was not included in todays build but should be on tomorrows.

Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Eva Brombacher <brombach using imbi.uni-freiburg.de>
Sent: Thursday, March 26, 2020 2:35 PM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Fwd: 'MBQN' Bioconductor package

Dear Sir or Madam,

Ariane Schad forwarded the e-mail below from Kayla E. Interdonato to me
regarding the MBQN Bioconductor package.

I tried to push the newest version to the release branch using the
following commands:

git fetch upstream
git checkout -b RELEASE_3_10 upstream/RELEASE_3_10
git fetch --all
git merge master
git push upstream RELEASE_3_10

When I checked, however, on
https://bioconductor.org/checkResults/3.10/bioc-LATEST/ I still only see
the old "1.0.0" package version.

Could you please let me know if I'm missing something and how to fix this.

Many thanks for your help in advance.

Best wishes,

Eva Brombacher

Am 26.03.20 um 09:04 schrieb ariane.schad:
> Von meinem Samsung Galaxy Smartphone gesendet.
> -------- Urspr�ngliche Nachricht --------
> Von: "Interdonato, Kayla" <Kayla.Morrell using RoswellPark.org>
> Datum: 25.03.20 00:02 (GMT+01:00)
> An: ariane.schad using fdm.uni-freiburg.de
> Betreff: 'MBQN' Bioconductor package
> The next Bioconductor release 3.11 is scheduled for April 28th.
> Commits should
> be made to the current 3.10 release by April 10th and the last day to
> commit
> to the devel branch is April 24th.
> We like to make an effort to have all Bioconductor packages building and
> checking without ERROR or TIMEOUT in both release and devel versions.
> Currently
> your package is producing an ERROR for all three builders in the both the
> release and devel version of Bioconductor. I see changes are being
> made to the
> devel version of the package but could you please investigate the
> release errors
> as soon as possible.
> Release version -
> https://bioconductor.org/checkResults/3.10/bioc-LATEST/MBQN/
> If you need any assistance please feel free to ask questions at
> bioc-devel using r-project.org.
> *Kayla E. Interdonato, MS*
> Programmer/Analyst
> Bioconductor Core Team
> Roswell Park Cancer Institute
> Department of Biostatistics & Bioinformatics
> (716)845-1300 x4621

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