[Bioc-devel] Bioconductor package IMMAN

minoo ashtiani @@ht|@n|@m|noo @end|ng |rom gm@||@com
Mon Mar 23 11:26:15 CET 2020

Hi Lori,

Thanks for the update. I edited the vignette in which the platform error
comes from that. I updated the by using


    git push origin master


command and it was OK, however when I wanted to run the second command line


   git push upstream master


I faced error and I have no idea how to fix it. Here is a summary of the
output of the two commands line:

$ git push origin master
Enumerating objects: 9, done.
Counting objects: 100% (9/9), done.
Delta compression using up to 4 threads
Compressing objects: 100% (4/4), done.
Writing objects: 100% (5/5), 409 bytes | 136.00 KiB/s, done.
Total 5 (delta 3), reused 0 (delta 0)
To git.bioconductor.org:packages/IMMAN.git
   05b59cb..01a56eb  master -> master

$ git push upstream master
To https://github.com/Minoo-ASTY/IMMAN.git
 ! [rejected]        master -> master (non-fast-forward)
error: failed to push some refs to 'https://github.com/Minoo-ASTY/IMMAN.git'
hint: Updates were rejected because the tip of your current branch is behind
hint: its remote counterpart. Integrate the remote changes (e.g.
hint: 'git pull ...') before pushing again.
hint: See the 'Note about fast-forwards' in 'git push --help' for details.

Is there any problem with or getting the output of "git push original
master" is enough?

All the bests,

On Mon, Mar 16, 2020 at 2:50 PM Shepherd, Lori <
Lori.Shepherd using roswellpark.org> wrote:

> Dear package maintainer,
> Please be aware your package continues to fail on Bioconductor devel
> 3.11.   Bioconductor release is scheduled for Tuesday April 28th. We
> appreciate
> your quick response in this matter. If your package remains broken we will
> begin
> the deprecation process to remove the package from Bioconductor.
> http://bioconductor.org/checkResults/devel/bioc-LATEST/IMMAN/
> Lori Shepherd
> Bioconductor Core Team
> Roswell Park Comprehensive Cancer Center
> Department of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
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Minoo Ashtiani,

Research Assistant @ Russell Lab, Heidelberg University
+491605667176 Germany
minoo.ashtiani using bioquant.uni-heidelberg.de

for accessing papers:

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