[Bioc-devel] Unable to replicate Windows build error on new package.

Shepherd, Lori Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Tue Jul 7 21:15:30 CEST 2020


Your reviewer should be aware to ignore the error and will review your package shortly.

Cheers


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Erik Christensen <echris3 using uwo.ca>
Sent: Tuesday, July 7, 2020 3:10 PM
To: Shepherd, Lori <Lori.Shepherd using RoswellPark.org>; bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Unable to replicate Windows build error on new package.

Thanks,

Do I need to bump the version or do anything to trigger a rebuild or just wait for review now?


--

Erik Christensen <echris3 using uwo.ca<mailto:echris3 using uwo.ca>>

-----Original Message-----
From: "Shepherd, Lori" <Lori.Shepherd using roswellpark.org<mailto:%22Shepherd,%20Lori%22%20%3cLori.Shepherd using roswellpark.org%3e>>
To: Erik Christensen <echris3 using uwo.ca<mailto:Erik%20Christensen%20%3cechris3 using uwo.ca%3e>>, bioc-devel using r-project.org <bioc-devel using r-project.org<mailto:%22bioc-devel using r-project.org%22%20%3cbioc-devel using r-project.org%3e>>
Subject: Re: [Bioc-devel] Unable to replicate Windows build error on new package.
Date: Mon, 06 Jul 2020 11:56:49 +0000

Please ignore the build bin ERROR.  I think this is an issue on the Bioconductor build system rather than directly related to your package.


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Erik Christensen <echris3 using uwo.ca>
Sent: Friday, July 3, 2020 4:39 PM
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] Unable to replicate Windows build error on new package.

Hi,

I'm working on a new R package (https://secure-web.cisco.com/1HFmLtrnT-HzI71X6sTuc9lAzhWM5lqF6PVrvPG22uGJQ6qshZL6PR6Me8GyEEZ2jjOcVzxmleHFajMBY7Bsfbi9WOEra50LcQj-wHINOt3_vsxO5Jak5M-WWZOZPSKD1yLCGYgI8tAUMBUN4gTuhZ2XHAhvzhqMAZ-aLyL_Yktw-mtQPnMhh_P1V2x1vytIErFrJfUhS0pchwLBiWBzXjFSQHsBKtyULnKTpmLadc_-6INJ9cs9f7TCsDGjlEsfxalQxXoMgPVVqe0mcIqP2n3_a12ssip5U57a9QXImssNUY3LUAQb3xMOybkkNQqN_PRtKBu8Kl02VXmYAUucRBA/https%3A%2F%2Fgithub.com%2Fshooshtarilab%2FTMExplorer) and don't quite understand the build error I'm getting. I'm able to build the binary package without problems on my Windows install (I'm primarily a Linux dev) but the Bioconductor build system fails.

Here is a link to the build report: http://secure-web.cisco.com/1wu17svsUuFvP8L1S81mY0Gcj-x0keg5i7w30tL03XB1VhAvG334oGtc4DefhDqvqCFxS9MWXaVtJnuGNqYOmqTayhjkWmwH7ZY8rb8Z_rl8n8i9KWL6U2oTMYPjwNKESb-sgZoQ2waoUvFrAIx4zp_3Jqa9Rbrwqg_fzpwTkZSfV2yn9MQThig1wkKXYiAcvlDw34RyYjBDKt8XrIW0CmmpBSxindCwBJIlrD9nbOSciI_Lkb5rIrzU7II4muU1vEY5hGgufnH8euwo9VB0rqsgrXHP2NLbbxoAP5U9AHG-_5PFz7tdqm5kayxJ4nPf6BNm-j8dey4tl2JM4Q8QXYWhMnPZuHRZhaP1Vz8CqbqQ/http%3A%2F%2Fbioconductor.org%2Fspb_reports%2FTMExplorer_buildreport_20200703160041.html%23tokay1_buildbin_anchor

How should I interpret this error so I can fix the package?

--

Erik Christensen <echris3 using uwo.ca>
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Bioc-devel using r-project.org mailing list
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