[Bioc-devel] How to speed up GRange comparision

Pages, Herve hp@ge@ @end|ng |rom |redhutch@org
Thu Jan 30 20:20:11 CET 2020


On 1/30/20 11:10, Hervé Pagès wrote:
> Yes poverlaps() is a good option, as mentioned earlier.

Well actually not. Looks like it's broken:

 > poverlaps(GRanges("chr1:11-15"), GRanges("chr1:16-20"))
Error in isSingleNumber(minoverlap) : object 'minoverlaps' not found

H.


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