[Bioc-devel] Updating for 3.11

Michael Love m|ch@e||@@|@h|ove @end|ng |rom gm@||@com
Tue Jan 7 20:01:11 CET 2020


Thanks for the note Karl, and sorry for the break.

For others, the change in DESeq2::lfcShrink is that now type="apeglm"
is the default instead of type="normal".

For the past two releases, users have been getting a message when they
run with the default argument that type="normal" performs worse the
other two shrinkage options available.

best,
Mike



More information about the Bioc-devel mailing list