[Bioc-devel] Fwd: Changing the maintanor of IMMAN package

[Turaga, Nitesh]

Hi Minoo,

I'm adding this chain to the bioc-devel thread for follow up.

I've checked your Git credentials on your account with Bioconductor. Everything is fine on our end. You need to actually push to the remote repository once you have your "remotes" set up correctly.

http://bioconductor.org/developers/how-to/git/

I'm attaching the link to the documentation again. If you need more help please attach the error messages you are seeing. Also attach the outputs of the commands,

`git remote -v`


Best,

Nitesh

Begin forwarded message:

From: ni41435_ca <nitesh.turaga using roswellpark.org<mailto:nitesh.turaga using roswellpark.org>>
Subject: Re: [Bioc-devel] Changing the maintanor of IMMAN package
Date: February 20, 2020 at 8:34:46 AM EST
To: minoo ashtiani <ashtiani.minoo using gmail.com<mailto:ashtiani.minoo using gmail.com>>

I see that the GitHub username has been changed by you already to the new one.

You just have to get your remote set up correctly by following the directions in the documentation.

Best,

Nitesh

On Feb 20, 2020, at 6:59 AM, minoo ashtiani <ashtiani.minoo using gmail.com<mailto:ashtiani.minoo using gmail.com>> wrote:

Thanks a lot, Nitesh.

I will check them out. My old GitHub account was  https://github.com/Minoo-Ashtiani  and the new one is https://github.com/Minoo-ASTY.

Thanks a lot for your assistance.

Minoo

On Wed, Feb 19, 2020 at 5:23 PM Turaga, Nitesh <Nitesh.Turaga using roswellpark.org<mailto:Nitesh.Turaga using roswellpark.org>> wrote:
Hi,

The remote is wrong.

You need to have to do something similar to #6 http://bioconductor.org/developers/how-to/git/maintain-github-bioc/.

Your remote should look like this, (but instead of BiocGenerics , it should be your package name) and (instead of <developer> it should be your GitHub username).

git remote -v

origin  git using github.com<mailto:git using github.com>:<developer>/BiocGenerics.git (fetch)
origin  git using github.com<mailto:git using github.com>:<developer>/BiocGenerics.git (push)
upstream    git using git.bioconductor.org<mailto:git using git.bioconductor.org>:packages/BiocGenerics.git (fetch)
upstream    git using git.bioconductor.org<mailto:git using git.bioconductor.org>:packages/BiocGenerics.git (push)

Please also take a look at the documentation we have here http://bioconductor.org/developers/how-to/git/.

It is very helpful. Can you give me your old GitHub account and new GitHub account links?

Best,

Nitesh

On Feb 19, 2020, at 10:06 AM, minoo ashtiani <ashtiani.minoo using gmail.com<mailto:ashtiani.minoo using gmail.com>> wrote:

Hi Nitesh,

Thanks for your reply. The problem is my previous github account which was linked with my package repository is blocked. I tried to change my username and email address in BioCredential but its still not working as my last log in date is not changing anymore. I think as my whole account is changed maybe bioconductor team should changed it, I guess.
In the another hand, this is the result of step 2 try on my system:
$ git remote -v
origin  LINK (fetch)
origin  LINK (push)


I would be very grateful if you help me with this problem.

Bests,
Minoo

On Tue, Feb 18, 2020 at 3:24 PM Turaga, Nitesh <Nitesh.Turaga using roswellpark.org<mailto:Nitesh.Turaga using roswellpark.org>> wrote:
Hi,

The error you are showing in your feed is currently saying, you are NOT in a repository which is hosted by github.

Also, your remotes should be the set to look like Step #2 (http://bioconductor.org/developers/how-to/git/push-to-github-bioc/). If that is set up, your GitHub name should have NO effect on pushing to Bioconductor.

If you'd like to change your Github username, you can log into the BiocCredentials application, and change your Github username on your account.

Best,

Nitesh

On Feb 18, 2020, at 8:51 AM, minoo ashtiani <ashtiani.minoo using gmail.com<mailto:ashtiani.minoo using gmail.com>> wrote:

Hi to all,

This is Minoo Ashtiani the maintainer of "IMMAN" software package. My
git-hub account is changed from "Minoo-Ashtiani" to "Minoo-ASTY". Now I
want to update the package using my new account however I cant. When I want
push to the origin I faced this errors:

git push origin master
      fatal: 'LINK' does not appear to be a git repository
               fatal: Could not read from remote repository.


What should I do? Any help would be appreciated.
P.S. I am the only maintainer of this package.
--
Minoo Ashtiani,

Research Assistant @ Russell Lab, Heidelberg University
+491605667176 Germany
minoo.ashtiani using bioquant.uni-heidelberg.de<mailto:minoo.ashtiani using bioquant.uni-heidelberg.de>

for accessing papers:
https://scholar.google.com/citations?user=nnCwxpEAAAAJ&hl=en

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--
Minoo Ashtiani,

Research Assistant @ Russell Lab, Heidelberg University
+491605667176 Germany
minoo.ashtiani using bioquant.uni-heidelberg.de<mailto:minoo.ashtiani using bioquant.uni-heidelberg.de>

for accessing papers: https://scholar.google.com/citations?user=nnCwxpEAAAAJ&hl=en



This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.


--
Minoo Ashtiani,

Research Assistant @ Russell Lab, Heidelberg University
+491605667176 Germany
minoo.ashtiani using bioquant.uni-heidelberg.de<mailto:minoo.ashtiani using bioquant.uni-heidelberg.de>

for accessing papers: https://scholar.google.com/citations?user=nnCwxpEAAAAJ&hl=en





This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.
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