[Bioc-devel] To Push or Not To Push?

Chris Eeles chr|@topher@ee|e@ @end|ng |rom out|ook@com
Sun Apr 26 02:27:20 CEST 2020

Hello Bioc-Devel community,

We recently submitted CoreGx to Bioconductor and am happy to announce it was accepted. However, the package has not yet made it into the 3.11 build and we are concerned it may not make the release.

Our existing Bioconductor package, PharmacoGx, has significant updates which depend on CoreGx; thus we are hesitant to push our updates without CoreGx being available in 3.11.

I wonder if anyone can provide guidance on how best to move forward? We would very much like to get the updated PharmacoGx into this release, but don't want to risk releasing a package without a dependency. Should we push and hope for the best or wait until tomorrow to see if we make the final build?

Any advice would be appreciated.

Thanks for your support.

Christopher Eeles
Software Developer
BHK Laboratory<http://www.bhklab.ca/>
Princess Margaret Cancer Centre<https://www.pmgenomics.ca/pmgenomics/>
University Health Network<http://www.uhn.ca/>

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