[Bioc-devel] Package CNVPanelizer needs my attention

[Nitesh Turaga]

Hi,

First, it seems that your question was stripped because it was in HTML and the mailing list doesn't support that. (Martin can chime in if any additional details are needed here)

Second, for people wondering, this is the question,

"
Dear Martin, thanks for your reply,
 
The CNVpanelizer (Development version) package is showing an Error, and i need to fix it before the next Release is due.

The Problem is I can not Log into my Account or generate one as I get the following error message:
thomas_wolf71 using gmx.de is not associated with a maintainer of a Bioconductor package. Please check the spelling or contact bioc-devel using r-project.org for help. When I request a new password with my email adress nothing happens.
 
But i get the Mails to this adress (when there is a problem with package) and it is also on the CNVpanelizer Page.

It Is relatively urgent as otherwise i can't fix the current Problems of the Development version, Before the next Update of bioconductor.

Many thanks for your help
"

Third, the answer,

Thomas, your email wasn't listed for access. It seems Cristiano Oliveira is the only person who has had access to the package.

I've created a new BiocCredentials account for you. I'll send you the details of your credentials in a private email. 

Best,

Nitesh 




> On Apr 22, 2020, at 6:37 PM, Shepherd, Lori <Lori.Shepherd using RoswellPark.org> wrote:
> 
> I'm sorry I don't see any question or response to this?  Was there something you had a question about?
> 
> The package CNVPanelizer is failing on the builders across all platforms and needs attention.
> 
> 
> http://bioconductor.org/checkResults/devel/bioc-LATEST/CNVPanelizer/
> 
> 
> The ERROR has to do with changes in base R (4.0) and is a combination of matrix is now of class array and implementing length > 1 logic check.  Please see the troubleshooting documentation for advice on how to reproduce and fix these ERRORs.
> 
> 
> http://bioconductor.org/developers/how-to/troubleshoot-build-report/<http://bioconductor.org/developers/how-to/troubleshoot-build-report/#classEq>
> 
> 
> 
> 
> Lori Shepherd
> 
> Bioconductor Core Team
> 
> Roswell Park Comprehensive Cancer Center
> 
> Department of Biostatistics & Bioinformatics
> 
> Elm & Carlton Streets
> 
> Buffalo, New York 14263
> 
> ________________________________
> From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Thomas Wolf <Thomas_Wolf71 using gmx.de>
> Sent: Wednesday, April 22, 2020 5:18 PM
> To: bioc-devel using r-project.org <bioc-devel using r-project.org>; christiano oliveira <cristiano_manuel using hotmail.com>
> Subject: Re: [Bioc-devel] Package CNVPanelizer needs my attention
> 
> 
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