[Bioc-devel] R-devel for Windows: Rtools3.5 vs Rtools4.0

Hervé Pagès hp@ge@ @end|ng |rom |redhutch@org
Tue Apr 21 10:50:58 CEST 2020 

On 4/20/20 23:28, Gordon K Smyth wrote:
> Thanks, that does help. So it seems that R-4.0.0 will use
> 
>    rtools40/mingw64/bin/gcc.exe
> 
> and I'm guessing that R-4.1.0 uses
> 
>    rtools40/mingw64/bin/x86_64-w64-mingw32-gcc-8.3.0.exe

I didn't try R 4.1.0 yet so don't know what it uses but I'm surprised it 
uses something different than R 4.0.0. Are you saying that 'R CMD config 
CC' returns /mingw64/bin/x86_64-w64-mingw32-gcc-8.3.0 with the latest 
Windows build of R 4.1.0?

Anyway I still have 6 months to worry about what R 4.1.0 does ;-)

Cheers,
H.

> 
> Both files in are in the same directory, so R-4.0.0 and R-4.1.0 should both work with same Windows setup (which is afterall what the Rtools webpage says).
> 
> Thanks
> Gordon
> 
>> -----Original Message-----
>> From: Hervé Pagès <hpages using fredhutch.org>
>> Sent: Tuesday, 21 April 2020 2:55 PM
>> To: Gordon K Smyth <smyth using wehi.edu.au>; Martin Morgan
>> <mtmorgan.bioc using gmail.com>; bioc-devel using r-project.org
>> Cc: Yunshun Chen <yuchen using wehi.edu.au>
>> Subject: Re: [Bioc-devel] R-devel for Windows: Rtools3.5 vs Rtools4.0
>>
>> Yes, all builds of R 4.0 and above are now using Rtools40 on Windows. See:
>>
>>     https://urldefense.proofpoint.com/v2/url?u=https-3A__cran.r-2Dproject.org_bin_windows_Rtools_&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=Lbl2W3r-f_jIrRVzr8IFYC0x_V3F3tjiBkHuXyGBhWA&s=Os0nDoCIS80pkl11embl1PwAXrLmd7lV67FCUN2db-o&e=
>>
>> AFAIK there has been no official announcement about this on the various
>> R-* mailing lists but this is suggested by the output of 'R CMD config
>> CC' which has changed from C:/Rtools/mingw_64/bin/gcc to
>> /mingw64/bin/gcc with the most recent Windows builds of R 4.0.0.
>>
>> /mingw64/bin/gcc and /mingw32/bin/gcc are the paths to the 64-bit and
>> 32-bit compilers **in the Msys environment** that is shipped with
>> Rtools40. These paths are relative to the location of Rtools40, which by
>> default is C:\Rtools40.
>>
>> Hope this helps,
>> H.
>>
>>
>> On 4/20/20 19:38, Gordon K Smyth wrote:
>>> Hi Herve,
>>>
>>> Ah, I see now.
>>>
>>> I was getting confused by the CRAN page that points to R-4.1.0 for Windows
>> and says it "will eventually become the next major release of R". I see now that
>> we should be using R-4.0.0 RC instead, which is the patched link.
>>>
>>> Can I confirm whether we should be using Rtools3.5 or Rtools4.0 with R-4.0.0
>> RC for Windows? The release note for R-4.0.0 RC says that it was ported by
>> Guido Masarotto, Brian Ripley and Duncan Murdoch, which to me means it must
>> be using the older toolchain. I had associated that toolchain in my mind with
>> Rtool3.5, but perhaps without any proper justification. Maybe Rtools4.0
>> supports both the 4.0.0 and 4.1.0 pipelines.
>>>
>>> Thanks
>>> Gordon
>>>
>>>> -----Original Message-----
>>>> From: Hervé Pagès <hpages using fredhutch.org>
>>>> Sent: Tuesday, 21 April 2020 12:01 PM
>>>> To: Gordon K Smyth <smyth using wehi.edu.au>; Martin Morgan
>>>> <mtmorgan.bioc using gmail.com>; bioc-devel using r-project.org
>>>> Cc: Yunshun Chen <yuchen using wehi.edu.au>
>>>> Subject: Re: [Bioc-devel] R-devel for Windows: Rtools3.5 vs Rtools4.0
>>>>
>>>> Hi Gordon,
>>>>
>>>> The Bioconductor version to be released (BioC 3.11) uses R 4.0, not R
>>>> 4.1. The latest Windows built of R 4.0 is available on CRAN here:
>>>>
>>>>      https://urldefense.proofpoint.com/v2/url?u=https-3A__cran.r-
>> 2Dproject.org_bin_windows_base_rpatched.html&d=DwIGaQ&c=eRAMFD45gAf
>> qt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=hj
>> 173hPUpLOLp7dFQ_16azQNCbeFfRPfQqgksa9-
>> 15s&s=H7efBWjbnmjHS7SQKjsjRlOG_7OvsT_Aq6rNUqJTK8c&e=
>>>>
>>>> Note that the upcoming devel version of Bioconductor (BioC 3.12) will
>>>> still be based on R 4.0. We'll only start using R 4.1 for BioC 3.13.
>>>>
>>>> Cheers,
>>>> H.
>>>>
>>>>
>>>> On 4/20/20 17:42, Gordon K Smyth wrote:
>>>>> Hi Martin,
>>>>>
>>>>> I may have jumped to the wrong conclusion as to the cause of the problem.
>>>> The problem we are observing is that BiocManager::install does not currently
>>>> work with R Devel for Windows 2020-04-18 (which the installer is calling R
>> 4.1.0)
>>>> while it still works fine with R Devel for Windows 2020-02-15 (which the
>> installer
>>>> is calling R 4.0.0). In the former case, the installer is trying to find a 4.1
>>>> repository that doesn't seem to exist.
>>>>>
>>>>> Note that I have not renamed R-devel to R 4.1.0 myself. The r-devel-win.exe
>>>> installer automatically labels the R shortcut as "R 4.1.0".
>>>>>
>>>>> I am assuming that Bioconductor packages that need compilation have to
>> be
>>>> build using the same toolchain as used for R itself. Since I can install Bioc
>>>> packages with R 4.0.0, I assume that I am getting packages built with
>> Rtools3.5.
>>>> If there is an Rtools4.0 version of Bioc-devel, where is it?
>>>>>
>>>>> I can git clone the source code for Bioc packages and compile them
>>>> successfully for R 4.1.0 using Rtools4.0, but that's more tedious that using
>>>> install().
>>>>>
>>>>> It is getting very close to the Bioc 3.11 Release, so we would like to make
>> sure
>>>> that everything works ok with the latest version of R.
>>>>>
>>>>> Regards
>>>>> Gordon
>>>>>
>>>>> ------------- R Session with R 4.1.0 for Windows  (fails) --------------
>>>>>
>>>>> R Under development (unstable) (2020-04-18 r78255) -- "Unsuffered
>>>> Consequences"
>>>>> Copyright (C) 2020 The R Foundation for Statistical Computing
>>>>> Platform: x86_64-w64-mingw32/x64 (64-bit)
>>>>>
>>>>> R is free software and comes with ABSOLUTELY NO WARRANTY.
>>>>> You are welcome to redistribute it under certain conditions.
>>>>> Type 'license()' or 'licence()' for distribution details.
>>>>>
>>>>> R is a collaborative project with many contributors.
>>>>> Type 'contributors()' for more information and
>>>>> 'citation()' on how to cite R or R packages in publications.
>>>>>
>>>>> Type 'demo()' for some demos, 'help()' for on-line help, or
>>>>> 'help.start()' for an HTML browser interface to help.
>>>>> Type 'q()' to quit R.
>>>>>
>>>>>> install.packages("BiocManager")
>>>>> --- Please select a CRAN mirror for use in this session ---
>>>>> trying URL 'https://urldefense.proofpoint.com/v2/url?u=https-
>>>>
>> 3A__mirror.aarnet.edu.au_pub_CRAN_bin_windows_contrib_4.1_BiocManager
>>>> -
>>>>
>> 5F1.30.10.zip&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWd
>>>>
>> GbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAM
>>>>
>> UxFFSy3MRDadA&s=5nTgU8SemnUqthnJ85luoxh9XILEd0cG9DwDvaYJG9o&e= '
>>>>> Content type 'application/zip' length 99799 bytes (97 KB)
>>>>> downloaded 97 KB
>>>>>
>>>>> package ‘BiocManager’ successfully unpacked and MD5 sums checked
>>>>>
>>>>> The downloaded binary packages are in
>>>>>
>>>> C:\Users\smyth\AppData\Local\Temp\RtmpaqaFCD\downloaded_packages
>>>>>> library(BiocManager)
>>>>> Bioconductor version 3.11 (BiocManager 1.30.10), ?BiocManager::install for
>>>> help
>>>>>> install("edgeR")
>>>>> Bioconductor version 3.11 (BiocManager 1.30.10), R Under development
>>>> (unstable) (2020-04-18 r78255)
>>>>> Installing package(s) 'BiocVersion', 'edgeR'
>>>>> also installing the dependencies ‘limma’, ‘locfit’, ‘Rcpp’
>>>>>
>>>>> Warning: unable to access index for repository
>>>> https://urldefense.proofpoint.com/v2/url?u=https-
>>>>
>> 3A__bioconductor.org_packages_3.11_bioc_bin_windows_contrib_4.1&d=DwI
>>>>
>> GaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZv
>>>>
>> SXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAMUxFFSy3MRDadA&s=N
>>>> 1ntYHJbzM64QzE10mXfuIkCRE5EOa74pPWKyz9jXBs&e= :
>>>>>      cannot open URL 'https://urldefense.proofpoint.com/v2/url?u=https-
>>>>
>> 3A__bioconductor.org_packages_3.11_bioc_bin_windows_contrib_4.1_PACKA
>>>>
>> GES&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJ
>>>>
>> YbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAMUxFFSy3M
>>>> RDadA&s=86-euOILGSDTX4uN2pbWAfyQ-7uTcpiAXMB8w1YQGeg&e= '
>>>>> Warning: unable to access index for repository
>>>> https://urldefense.proofpoint.com/v2/url?u=https-
>>>>
>> 3A__bioconductor.org_packages_3.11_data_annotation_bin_windows_contrib
>>>>
>> _4.1&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJ
>>>>
>> YbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAMUxFFSy3M
>>>> RDadA&s=0XEOcyZGmPoY-0_TdNiRPRUwS4MWta2X2LPZTYeqzuQ&e= :
>>>>>      cannot open URL 'https://urldefense.proofpoint.com/v2/url?u=https-
>>>>
>> 3A__bioconductor.org_packages_3.11_data_annotation_bin_windows_contrib
>>>>
>> _4.1_PACKAGES&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvime
>>>>
>> WdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSA
>>>> MUxFFSy3MRDadA&s=Rsz3EC5iYpvb0gWD5S72old9UDv0C0q08i7vgyfhl-
>> Q&e= '
>>>>> Warning: unable to access index for repository
>>>> https://urldefense.proofpoint.com/v2/url?u=https-
>>>>
>> 3A__bioconductor.org_packages_3.11_data_experiment_bin_windows_contrib
>>>>
>> _4.1&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJ
>>>>
>> YbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAMUxFFSy3M
>>>> RDadA&s=L0PeotXMcsvCuc8RpvvheLWQKI8Wt8OeQchDK_sFgyk&e= :
>>>>>      cannot open URL 'https://urldefense.proofpoint.com/v2/url?u=https-
>>>>
>> 3A__bioconductor.org_packages_3.11_data_experiment_bin_windows_contrib
>>>>
>> _4.1_PACKAGES&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvime
>>>>
>> WdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSA
>>>>
>> MUxFFSy3MRDadA&s=XOuwgeMamR0EZ1eSO50h2HGufpMZuQB4WUZxuqRszK
>>>> w&e= '
>>>>> Warning: unable to access index for repository
>>>> https://urldefense.proofpoint.com/v2/url?u=https-
>>>>
>> 3A__bioconductor.org_packages_3.11_workflows_bin_windows_contrib_4.1&d
>>>>
>> =DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0
>>>>
>> WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAMUxFFSy3MRDadA
>>>> &s=CKBM9wFJThnPfMW3F6AE_RRkqTJxa2eVZ-DSKbzDwWE&e= :
>>>>>      cannot open URL 'https://urldefense.proofpoint.com/v2/url?u=https-
>>>>
>> 3A__bioconductor.org_packages_3.11_workflows_bin_windows_contrib_4.1_P
>>>>
>> ACKAGES&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbW
>>>>
>> Y_wJYbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAMUxFFS
>>>> y3MRDadA&s=AaHQ9IYjokUEVz3aqK4RQwERaY4wCpusHTE1mwqiCkc&e= '
>>>>> Packages which are only available in source form, and may need
>> compilation
>>>> of
>>>>>      C/C++/Fortran: ‘limma’ ‘edgeR’
>>>>>      These will not be installed
>>>>> trying URL 'https://urldefense.proofpoint.com/v2/url?u=https-
>>>> 3A__mirror.aarnet.edu.au_pub_CRAN_bin_windows_contrib_4.1_locfit-
>> 5F1.5-
>>>>
>> 2D9.4.zip&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbW
>>>>
>> Y_wJYbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAMUxFFS
>>>> y3MRDadA&s=sE30CsMU7wFJBEPs_eWWTe_oZA4lBJTUXxT_7JY1jAE&e= '
>>>>> Content type 'application/zip' length 670513 bytes (654 KB)
>>>>> downloaded 654 KB
>>>>>
>>>>> trying URL 'https://urldefense.proofpoint.com/v2/url?u=https-
>>>> 3A__mirror.aarnet.edu.au_pub_CRAN_bin_windows_contrib_4.1_Rcpp-
>>>>
>> 5F1.0.4.6.zip&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdG
>>>>
>> bWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAMUx
>>>> FFSy3MRDadA&s=IV-WYy4dPkxhf5wtp0GuGtGXYYgptdaKaZ0mCmoLDFY&e= '
>>>>> Content type 'application/zip' length 3168097 bytes (3.0 MB)
>>>>> downloaded 3.0 MB
>>>>>
>>>>> package ‘locfit’ successfully unpacked and MD5 sums checked
>>>>> package ‘Rcpp’ successfully unpacked and MD5 sums checked
>>>>>
>>>>> The downloaded binary packages are in
>>>>>
>>>> C:\Users\smyth\AppData\Local\Temp\RtmpaqaFCD\downloaded_packages
>>>>> installing the source package ‘BiocVersion’
>>>>>
>>>>> trying URL 'https://urldefense.proofpoint.com/v2/url?u=https-
>>>> 3A__bioconductor.org_packages_3.11_bioc_src_contrib_BiocVersion-
>>>>
>> 5F3.11.1.tar.gz&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeW
>>>>
>> dGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAM
>>>>
>> UxFFSy3MRDadA&s=Eh_l16sA9zBwdc9KcuEq8ziBm6a7YqR7KMJ3i0q0gDw&e= '
>>>>> Content type 'application/x-gzip' length 980 bytes
>>>>> downloaded 980 bytes
>>>>>
>>>>> * installing *source* package 'BiocVersion' ...
>>>>> ** using staged installation
>>>>> ** help
>>>>> *** installing help indices
>>>>>      converting help for package 'BiocVersion'
>>>>>        finding HTML links ... done
>>>>>        BiocVersion-pkg                         html
>>>>> ** building package indices
>>>>> ** testing if installed package can be loaded from temporary location
>>>>> ** testing if installed package can be loaded from final location
>>>>> ** testing if installed package keeps a record of temporary installation path
>>>>> * DONE (BiocVersion)
>>>>> Making 'packages.html' ... done
>>>>>
>>>>> The downloaded source packages are in
>>>>>
>>>> ‘C:\Users\smyth\AppData\Local\Temp\RtmpaqaFCD\downloaded_packages’
>>>>>
>>>>> ------------- End of R Session with R 4.0.0 for Windows  --------------
>>>>>
>>>>> ------------- R Session with R 4.0.0 for Windows  (successful) --------------
>>>>>
>>>>> R Under development (unstable) (2020-02-15 r77808) -- "Unsuffered
>>>> Consequences"
>>>>> Copyright (C) 2020 The R Foundation for Statistical Computing
>>>>> Platform: x86_64-w64-mingw32/x64 (64-bit)
>>>>>
>>>>> R is free software and comes with ABSOLUTELY NO WARRANTY.
>>>>> You are welcome to redistribute it under certain conditions.
>>>>> Type 'license()' or 'licence()' for distribution details.
>>>>>
>>>>> R is a collaborative project with many contributors.
>>>>> Type 'contributors()' for more information and
>>>>> 'citation()' on how to cite R or R packages in publications.
>>>>>
>>>>> Type 'demo()' for some demos, 'help()' for on-line help, or
>>>>> 'help.start()' for an HTML browser interface to help.
>>>>> Type 'q()' to quit R.
>>>>>
>>>>>> install("edgeR")
>>>>> Error in install("edgeR") : could not find function "install"
>>>>>> library(BiocManager")
>>>>>
>>>>> + > library("BiocManager")
>>>>> Bioconductor version 3.11 (BiocManager 1.30.10), ?BiocManager::install for
>>>> help
>>>>>> install("edgeR")
>>>>> Bioconductor version 3.11 (BiocManager 1.30.10), R Under development
>>>> (unstable) (2020-02-15 r77808)
>>>>> Installing package(s) 'edgeR'
>>>>> trying URL 'https://urldefense.proofpoint.com/v2/url?u=https-
>>>>
>> 3A__bioconductor.org_packages_3.11_bioc_bin_windows_contrib_4.0_edgeR-
>>>>
>> 5F3.29.1.zip&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdG
>>>>
>> bWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAMUx
>>>> FFSy3MRDadA&s=k3mNrMHBrm7lJNPmek3Hxf9nhnh5wbosiLl_G07B2dg&e= '
>>>>> Content type 'application/zip' length 3181389 bytes (3.0 MB)
>>>>> downloaded 3.0 MB
>>>>>
>>>>> package ‘edgeR’ successfully unpacked and MD5 sums checked
>>>>>
>>>>> The downloaded binary packages are in
>>>>>
>>>> C:\Users\smyth\AppData\Local\Temp\Rtmpy8bFkk\downloaded_packages
>>>>> Old packages: 'backports', 'BiocFileCache', 'BiocNeighbors', 'BiocStyle',
>>>> 'broom', 'dbplyr',
>>>>>      'foreign', 'GenomeInfoDb', 'GenomeInfoDbData', 'gtools', 'isoband',
>>>> 'MSnbase', 'nlme', 'purrr',
>>>>>      'Rcpp', 'RcppArmadillo', 'RCurl', 'Rhdf5lib', 'Rsubread', 'scran', 'survival',
>>>> 'tibble',
>>>>>      'tinytex', 'withr'
>>>>> Update all/some/none? [a/s/n]: n
>>>>>>
>>>>>
>>>>> ------------- R Session with R 4.0.0 for Windows  --------------
>>>>>
>>>>>
>>>>>> -----Original Message-----
>>>>>> From: Martin Morgan <mtmorgan.bioc using gmail.com>
>>>>>> Sent: Monday, 20 April 2020 7:44 PM
>>>>>> To: Gordon K Smyth <smyth using wehi.edu.au>; bioc-devel using r-project.org
>>>>>> Cc: Yunshun Chen <yuchen using wehi.edu.au>
>>>>>> Subject: Re: [Bioc-devel] R-devel for Windows: Rtools3.5 vs Rtools4.0
>>>>>>
>>>>>> The Bioconductor 3.11 builds transitioned in the last week to using the new
>>>> tool
>>>>>> chain, following CRAN's lead.
>>>>>>
>>>>>> As a sanity check (ours!) what makes you say
>>>>>>
>>>>>>>        It appears that the Bioconductor developmental repository is using
>>>> rtools35
>>>>>>
>>>>>> ?
>>>>>>
>>>>>> Martin Morgan
>>>>>>
>>>>>> On 4/19/20, 10:41 PM, "Bioc-devel on behalf of Gordon K Smyth" <bioc-
>>>> devel-
>>>>>> bounces using r-project.org on behalf of smyth using wehi.edu.au> wrote:
>>>>>>
>>>>>>        Dear Biocore team,
>>>>>>
>>>>>>        How is Bioconductor handling the transition to the new R for Windows
>>>>>> toolchain?
>>>>>>
>>>>>>        The R-Devel build for Windows currently available from CRAN uses
>> Jerome
>>>>>> Oom's new gcc 8.3.0 toolchain from rtools40, whereas R-Devel builds for
>>>>>> Windows downloaded from CRAN a couple of months ago used the older
>>>>>> rtool35 toolchain.
>>>>>>
>>>>>>        It appears that the Bioconductor developmental repository is using
>>>> rtools35,
>>>>>> which means that BiocManager::install is incompatible with the R-Devel
>> build
>>>> for
>>>>>> Windows now on CRAN but works with R-Devel from a month or two ago.
>>>>>>
>>>>>>        When Bioconductor 3.11 is released, will it be the rtools40 toolchain or
>>>>>> rtools35?
>>>>>>
>>>>>>        Thanks
>>>>>>        Gordon
>>>>>>
>>>>>>        ------------------------------------------
>>>>>>        Professor Gordon K Smyth
>>>>>>        Joint Head, Bioinformatics Division
>>>>>>        Walter and Eliza Hall Institute of Medical Research
>>>>> _______________________________________________
>>>>>
>>>>> The information in this email is confidential and intended solely for the
>>>> addressee.
>>>>> You must not disclose, forward, print or use it without the permission of the
>>>> sender.
>>>>>
>>>>> The Walter and Eliza Hall Institute acknowledges the Wurundjeri people of
>> the
>>>> Kulin
>>>>> Nation as the traditional owners of the land where our campuses are
>> located
>>>> and
>>>>> the continuing connection to country and community.
>>>>> _______________________________________________
>>>>> _______________________________________________
>>>>> Bioc-devel using r-project.org mailing list
>>>>> https://urldefense.proofpoint.com/v2/url?u=https-
>>>> 3A__stat.ethz.ch_mailman_listinfo_bioc-
>>>>
>> 2Ddevel&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY
>>>>
>> _wJYbW0WYiZvSXAJJKaaPhzWA&m=DRSQA4QbwiZ7f47ejuutRgsCIctSAMUxFFSy
>>>> 3MRDadA&s=oP2Hrv49vSbxH33yx3wzKQcFGnzAt4vp9_A--YtrpOE&e=
>>>>>
>>>>
>>>> --
>>>> Hervé Pagès
>>>>
>>>> Program in Computational Biology
>>>> Division of Public Health Sciences
>>>> Fred Hutchinson Cancer Research Center
>>>> 1100 Fairview Ave. N, M1-B514
>>>> P.O. Box 19024
>>>> Seattle, WA 98109-1024
>>>>
>>>> E-mail: hpages using fredhutch.org
>>>> Phone:  (206) 667-5791
>>>> Fax:    (206) 667-1319
>>> _______________________________________________
>>>
>>> The information in this email is confidential and intended solely for the
>> addressee.
>>> You must not disclose, forward, print or use it without the permission of the
>> sender.
>>>
>>> The Walter and Eliza Hall Institute acknowledges the Wurundjeri people of the
>> Kulin
>>> Nation as the traditional owners of the land where our campuses are located
>> and
>>> the continuing connection to country and community.
>>> _______________________________________________
>>>
>>
>> --
>> Hervé Pagès
>>
>> Program in Computational Biology
>> Division of Public Health Sciences
>> Fred Hutchinson Cancer Research Center
>> 1100 Fairview Ave. N, M1-B514
>> P.O. Box 19024
>> Seattle, WA 98109-1024
>>
>> E-mail: hpages using fredhutch.org
>> Phone:  (206) 667-5791
>> Fax:    (206) 667-1319
> _______________________________________________
> 
> The information in this email is confidential and inte...{{dropped:23}}

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