[Bioc-devel] rstan related build error on tokay2

Martin Morgan mtmorg@n@b|oc @end|ng |rom gm@||@com
Sun Apr 19 00:22:56 CEST 2020

It seems that these three packages are building now on tokay2?



From: Simo Kitanovski <simo.kitanovski using uni-due.de>
Date: Saturday, April 18, 2020 at 5:56 PM
To: Martin Morgan <mtmorgan.bioc using gmail.com>, bioc-devel <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] rstan related build error on tokay2

Thank you, will let you know as more stable information is

available about the requirements.


On 16.04.20 7:51 PM, Martin Morgan wrote:

Thanks Simo. As you know the Windows toolchain is in the process of updating. Do you have any insight into the RStan requirements under Rtools4 (which should support C++14)?


On 4/15/20, 5:32 PM, "Bioc-devel on behalf of Simo Kitanovski" <bioc-devel-bounces using r-project.org on behalf of simo.kitanovski using uni-due.de><mailto:bioc-devel-bounces using r-project.orgonbehalfofsimo.kitanovski@uni-due.de> wrote:

    Dear all,

    I have noticed that 3 packages that depend on rstan (genphen, IgGeneUsage and banocc)

    seem to have build errors only on tokay2. The error messages are the same:

    /Compiling model ... ////Error: C++14 standard requested but CXX14 is not defined Execution halted/

    This error and the solution have been documented by the rstan community [1]. Would you

    mind checking whether these instructions have been followed when rstan was installed on

    tokay2. Alternative solutions are also welcome.




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