[Bioc-devel] regarding imports github R packages, in new R package's description file

[Krishan Gupta]

Ya so I can include git hub packages, in cran submission policy.
*Thanks and Regards*

*Krishan Gupta*

*PhD16008PhD Scholar*




On Fri, Apr 17, 2020 at 10:23 PM Shepherd, Lori <
Lori.Shepherd using roswellpark.org> wrote:

> This mailing list is for Bioconductor package development and Bioconductor
> submissions not CRAN.
>
> Bioconductor only allows dependencies from CRAN or Bioconductor and does
> not allow github only repositories.
>
> If you indeed meant to submit to CRAN you should check with CRAN's
> submission policies on what they allow:
> https://cran.r-project.org/web/packages/policies.html
>
>
>
> Lori Shepherd
>
> Bioconductor Core Team
>
> Roswell Park Comprehensive Cancer Center
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
> ------------------------------
> *From:* Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of
> Krishan Gupta <krishang using iiitd.ac.in>
> *Sent:* Friday, April 17, 2020 12:45 PM
> *To:* bioc-devel using r-project.org <bioc-devel using r-project.org>
> *Subject:* [Bioc-devel] regarding imports github R packages, in new R
> package's description file
>
> I want to build a new package to submit on CRAN, but my package has
> two dependencies harmony and iCTC which are available only on github.
> So now I can import these dependencies in description files.
> Imports:
>     BiocManager,
>     caret,
>     klaR,
>     randomForest,
>     gbm,
>     devtools,
>     harmony,
>     iCTC
> I did as shown above but I got an error,
> checking package dependencies ... ERROR
> Packages required but not available: 'harmony', 'iCTC'
> How can I resolve the error?
> *Thanks and Regards*
>
> *Krishan Gupta*
>
> *PhD16008PhD Scholar*
>
>         [[alternative HTML version deleted]]
>
> _______________________________________________
> Bioc-devel using r-project.org mailing list
>
> https://secure-web.cisco.com/1X7ntaZmDXfDBfzNmUV9Nn9nKY4Jf-6Xxjn3qQBu2ZaTpsT0kOgvP4ECgYOnsCzNJTEnBPotG0xHaX-4V2XjwJaBOvTpG5wRCgo6efcdZ1mNxtE9PBl4bxPEyX0tjV_wd5iBlgj1P5LTngGt_duprz0GJIpx5VXr1WVZ9tWC25wqY0B6cVCRkzDIoYJljiaxEzPncJSy2juwDmrYocyOcyTtydHeUEDV6JIuoKboTe7INnSLdVY0YPID2GCKwLWZ4jbEN8qCBKz1XsEXDeHRkfBaVE_B3svrDfI6VDWRpDC9T3EofkuMVMc64Z3XGuFqBy8WTm3_Qbd66QbJJKicKUw/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel
>
>
> This email message may contain legally privileged and/or confidential
> information. If you are not the intended recipient(s), or the employee or
> agent responsible for the delivery of this message to the intended
> recipient(s), you are hereby notified that any disclosure, copying,
> distribution, or use of this email message is prohibited. If you have
> received this message in error, please notify the sender immediately by
> e-mail and delete this email message from your computer. Thank you.

	[[alternative HTML version deleted]]