[Bioc-devel] regarding imports github R packages, in new R package's description file

Krishan Gupta kr|@h@ng @end|ng |rom |||td@@c@|n
Fri Apr 17 18:56:23 CEST 2020


Ya so I can include git hub packages, in cran submission policy.
*Thanks and Regards*

*Krishan Gupta*

*PhD16008PhD Scholar*




On Fri, Apr 17, 2020 at 10:23 PM Shepherd, Lori <
Lori.Shepherd using roswellpark.org> wrote:

> This mailing list is for Bioconductor package development and Bioconductor
> submissions not CRAN.
>
> Bioconductor only allows dependencies from CRAN or Bioconductor and does
> not allow github only repositories.
>
> If you indeed meant to submit to CRAN you should check with CRAN's
> submission policies on what they allow:
> https://cran.r-project.org/web/packages/policies.html
>
>
>
> Lori Shepherd
>
> Bioconductor Core Team
>
> Roswell Park Comprehensive Cancer Center
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
> ------------------------------
> *From:* Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of
> Krishan Gupta <krishang using iiitd.ac.in>
> *Sent:* Friday, April 17, 2020 12:45 PM
> *To:* bioc-devel using r-project.org <bioc-devel using r-project.org>
> *Subject:* [Bioc-devel] regarding imports github R packages, in new R
> package's description file
>
> I want to build a new package to submit on CRAN, but my package has
> two dependencies harmony and iCTC which are available only on github.
> So now I can import these dependencies in description files.
> Imports:
>     BiocManager,
>     caret,
>     klaR,
>     randomForest,
>     gbm,
>     devtools,
>     harmony,
>     iCTC
> I did as shown above but I got an error,
> checking package dependencies ... ERROR
> Packages required but not available: 'harmony', 'iCTC'
> How can I resolve the error?
> *Thanks and Regards*
>
> *Krishan Gupta*
>
> *PhD16008PhD Scholar*
>
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>
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