[Bioc-devel] Cairo error in Windows server

[Shepherd, Lori]

I just reinstalled Cairo again to both architectures.  Cairo is known to be a particular challenging package for our builders.  It looks like a new version appeared on CRAN this past weekend.




Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Yue Zhao (Jason) <yuezh using bu.edu>
Sent: Monday, April 13, 2020 5:14 PM
To: Shepherd, Lori <Lori.Shepherd using RoswellPark.org>
Cc: bioc-devel <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Cairo error in Windows server

Hi Lori,

Thanks for the previous update, but the same error shows up again today, would you please check the Cairo in the Windows server? Thank you!

PS. the error message: http://bioconductor.org/checkResults/release/bioc-LATEST/animalcules/tokay1-checksrc.html

Best,
Jason


--

Yue (Jason) Zhao

PhD Candidate, Bioinformatics Program

Boston University

yuezh using bu.edu<mailto:yuezh using bu.edu>


On Mon, Mar 16, 2020 at 12:37 PM Shepherd, Lori <Lori.Shepherd using roswellpark.org<mailto:Lori.Shepherd using roswellpark.org>> wrote:
I have just reinstalled Cairo on our builders and tested the install on both the 64-bit and 32-bit mode.  Hopefully this should clear up in tomorrows build report.  Please let us know if this continues to be an issue.


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org<mailto:bioc-devel-bounces using r-project.org>> on behalf of Yue Zhao (Jason) <yuezh using bu.edu<mailto:yuezh using bu.edu>>
Sent: Monday, March 16, 2020 10:38 AM
To: bioc-devel <bioc-devel using r-project.org<mailto:bioc-devel using r-project.org>>
Subject: [Bioc-devel] Cairo error in Windows server

Hello Bioc Community,

The CHECK in the windows server throws an error message that is not seen in
other platforms and local windows computer:

Error: .onLoad failed in loadNamespace() for 'Cairo', details:
  call: library.dynam("Cairo", pkgname, libname)
  error: DLL 'Cairo' not found: maybe not installed for this architecture?


The link to the report:
http://bioconductor.org/checkResults/release/bioc-LATEST/animalcules/tokay1-checksrc.html

We have tired to find solutions, but it seems like a problem with the
windows server at Bioc? Please let me know if you have some advice, I
really appreciate it.

Thanks!

Best,
Jason


*--*

*Yue (Jason) Zhao*

PhD Candidate, Bioinformatics Program

Boston University

yuezh using bu.edu<mailto:yuezh using bu.edu>

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