[Bioc-devel] Error for voom() in limma package

[James W. MacDonald]

This mailing list is for discussions about package development, not bug
reports. If you really think you have found a bug in voom (you probably
haven't), submit a self-contained example that produces the error on
https://support.bioconductor.org, or better yet, send it to Gordon Smyth
directly. You can find his email by doing

packageDescription("limma")$Main



On Tue, Jun 18, 2019 at 11:58 AM Lan Huong Nguyen <lanhuong using stanford.edu>
wrote:

> Hi,
>
> I am having an issue with running voom function. I believe it is caused be
> the line 73 in the voom.R file.
>
> f <- approxfun(l, rule = 2, ties = list("ordered", mean))
>
>
> The third argument causes the following error:
>
>  Error in get(as.character(FUN), mode = "function", envir = envir) :
>   object 'ties' of mode 'function' was not found
>
>
> Please let me know how the issue can be addressed.
>
> Best,
> Lan
> --
> Lan Huong Nguyen
> PhD Candidate
> ICME Stanford University
> Huang Building 475 Via Ortega,
> Stanford, CA 94305
> (650) 723-2560
> <
> https://www.google.com/search?q=icme&oq=icme&aqs=chrome..69i57j69i60j69i65l3j69i60.1858j0j7&sourceid=chrome&ie=UTF-8#
> >
>
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-- 
James W. MacDonald, M.S.
Biostatistician
University of Washington
Environmental and Occupational Health Sciences
4225 Roosevelt Way NE, # 100
Seattle WA 98105-6099

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