[Bioc-devel] Using BioC vignettes as Jupyter Notebooks
@neum@nn @end|ng |rom |pb-h@||e@de
Tue Jul 2 10:51:50 CEST 2019
last week over a beer some of us realized that (technically)
it is possible to run most Rmd vignettes as Jupiter Notebook.
So I created https://github.com/sneumann/bioc_notebooks
which takes some example packages and creates a Docker container
with converted vignettes. The resulting container
can be hosted locally, or on the binder system (see README).
We found this to be fun, and it could be used
as a great training resource. Only downside is
that the resulting containers are not exactly light-weight.
 See the issue in the repo where it fails.
IPB Halle AG Massenspektrometrie & Bioinformatik
Dr. Steffen Neumann http://www.IPB-Halle.DE
Weinberg 3 Tel. +49 (0) 345 5582 - 1470
06120 Halle +49 (0) 345 5582 - 0
sneumann(at)IPB-Halle.DE Fax. +49 (0) 345 5582 - 1409
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