[Bioc-devel] missing devel experiment data builds

Charlotte Soneson ch@r|otte@one@on @end|ng |rom gm@||@com
Fri Feb 1 07:54:21 CET 2019


That’s great, thanks a lot!
Charlotte

> On 1 Feb 2019, at 07:51, Pages, Herve <hpages using fredhutch.org> wrote:
> 
> Hi Charlotte,
> 
> The experiment data builds are back:
> 
> https://bioconductor.org/checkResults/devel/data-experiment-LATEST/
> 
> Cheers,
> 
> H.
> 
>> On 1/29/19 15:14, Pages, Herve wrote:
>> Thanks Charlotte for bringing this to our attention. Yes it looks like
>> there are some serious issues with the data experiment builds. Sorry for
>> that. We're working on it and will try to have them back on their feet
>> for the next build iteration (experiment data builds are scheduled to
>> run on Sundays, Tuesdays, and Thursdays only).
>> 
>> H.
>> 
>>> On 1/28/19 15:31, Charlotte Soneson wrote:
>>> Hi,
>>> I just wanted to ask whether there might be a problem with the devel builds for the experimental data packages. Judging from https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_checkResults_3.9_data-2Dexperiment-2DLATEST_-23&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=Jn_xC8_ESWECwXZsuqGd6F53rgJ53yWmDZxzacKwqgo&s=_3gZQLxaWN3XGt3oHy9w1GOei5voNMrHehjnQ8LV-iY&e= <https://urldefense.proofpoint.com/v2/url?u=http-3A__bioconductor.org_checkResults_3.9_data-2Dexperiment-2DLATEST_-23&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=Jn_xC8_ESWECwXZsuqGd6F53rgJ53yWmDZxzacKwqgo&s=_3gZQLxaWN3XGt3oHy9w1GOei5voNMrHehjnQ8LV-iY&e=> it seems that the latest snapshot is from more than two weeks ago. At least one package (tximportData) has been updated since this time (and the new version is indeed accessible via git). The release builds do not seem to have this issue.
>>> Thanks in advance!
>>> Charlotte
>>>    [[alternative HTML version deleted]]
>>> 
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> 
> -- 
> Hervé Pagès
> 
> Program in Computational Biology
> Division of Public Health Sciences
> Fred Hutchinson Cancer Research Center
> 1100 Fairview Ave. N, M1-B514
> P.O. Box 19024
> Seattle, WA 98109-1024
> 
> E-mail: hpages using fredhutch.org
> Phone:  (206) 667-5791
> Fax:    (206) 667-1319
> 



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