[Bioc-devel] Trigger a new build after version bump

Shepherd, Lori Lor|@Shepherd @end|ng |rom Ro@we||P@rk@org
Tue Dec 17 13:21:42 CET 2019


Jakob is correct.   To expand a bit more:
The results will not be present on today's build report but should be there on tomorrows.   We do a git pull around 4:45 PM EST for the daily builds.  If commits are made after that (which it seems like in this case) it would be on the following days.
For What Its worth I do see your changes on git.bioconductor.org so you were able to push them correctly.

Cheers,


Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Ahmed Metwally <ametwall using stanford.edu>
Sent: Tuesday, December 17, 2019 2:49 AM
To: Jakob Theorell <jakob.theorell using ndcn.ox.ac.uk>; bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: [Bioc-devel] Trigger a new build after version bump

Hi Jakob,

Thanks for your explanation. I was looking for any statement about how long should I wait but couldn't find any. I pushed the updates around 6 hours ago. I'll wait for 24-48h as you suggested and will check back.

Best,
________________________________
From: Jakob Theorell <jakob.theorell using ndcn.ox.ac.uk>
Sent: Monday, December 16, 2019 10:35 PM
To: Ahmed Metwally <ametwall using stanford.edu>; bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: Re: Trigger a new build after version bump

Dear Ahmed,
I am not in the core team, but I still wonder: how long have you waited since you pushed? During the review process you get an immediate update of the package upon push with a version bump, but with accepted packages it takes 24-48 hours for the changes to trickle through to the build report. And you have to go in and check the build reports yourself on the BioConductor sites related to the release and devel branches.
Best regards
Jakob Theorell, MD/PhD
Autoimmune Neurology Group
Nuffield Department of Clinical Neurosciences
University of Oxford

________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Ahmed Metwally <ametwall using stanford.edu>
Sent: 17 December 2019 02:34
To: bioc-devel using r-project.org <bioc-devel using r-project.org>
Subject: [Bioc-devel] Trigger a new build after version bump

Dear Bioc devel team,

OmicsLonDA package is failing to build on release and devel branches:
http://bioconductor.org/checkResults/release/bioc-LATEST/OmicsLonDA/
http://bioconductor.org/checkResults/devel/bioc-LATEST/OmicsLonDA/


I have fixed the issue and pushed the changes to RELEASE_3_10, and dev-master branch. I bumped the package version on the RELEASE_3_10 to v1.2.1 instead of v1.2.0. I did the same for the dev branch, bumped the version to v1.3.3 instead of v1.3.0. I was following instructions listed here: https://bioconductor.org/developers/how-to/git/sync-existing-repositories/

However, my changes didn't trigger a new build. In the past, when I was submitting the OmicsLonDA to Bioc, whenever I do version bump, I receive an email says that I successfully triggered a new build. This time I didn't receive any emails. Also, the build error and data don't change in the above-mentioned URLs to reflect a new build!


Please let me know what I'm missing here.
Thanks,

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