[Bioc-devel] Fixes to db0s and org.db's + rebuild annotations depending on these

[Van Twisk, Daniel]

Hello Bioconductor Community


We experienced some problems with our most recent annotations. The following updated orb.dbs and db0s should correct the issue. These is an existing problem with the UCSC's mouse knownGene resource the will be corrected on Monday next week. Please rebuild any annotations that depend on the db0s or org.dbs. We apologize for the inconvience and encourage you to point out any problems that you may experience with these packages.


Updated db0s:


anopheles.db0_3.8.2.tar.gz
arabidopsis.db0_3.8.2.tar.gz
bovine.db0_3.8.2.tar.gz
canine.db0_3.8.2.tar.gz
chicken.db0_3.8.2.tar.gz
chimp.db0_3.8.2.tar.gz
ecoliK12.db0_3.8.2.tar.gz
ecoliSakai.db0_3.8.2.tar.gz
fly.db0_3.8.2.tar.gz
human.db0_3.8.2.tar.gz
malaria.db0_3.8.2.tar.gz
mouse.db0_3.8.2.tar.gz
pig.db0_3.8.2.tar.gz
rat.db0_3.8.2.tar.gz
rhesus.db0_3.8.2.tar.gz
worm.db0_3.8.2.tar.gz
xenopus.db0_3.8.2.tar.gz
yeast.db0_3.8.2.tar.gz
zebrafish.db0_3.8.2.tar.gz


Updated Orgdbs:


GO.db_3.8.2.tar.gz
org.Ag.eg.db_3.8.2.tar.gz
org.At.tair.db_3.8.2.tar.gz
org.Bt.eg.db_3.8.2.tar.gz
org.Ce.eg.db_3.8.2.tar.gz
org.Cf.eg.db_3.8.2.tar.gz
org.Dm.eg.db_3.8.2.tar.gz
org.Dr.eg.db_3.8.2.tar.gz
org.EcK12.eg.db_3.8.2.tar.gz
org.EcSakai.eg.db_3.8.2.tar.gz
org.Gg.eg.db_3.8.2.tar.gz
org.Hs.eg.db_3.8.2.tar.gz
org.Mm.eg.db_3.8.2.tar.gz
org.Mmu.eg.db_3.8.2.tar.gz
org.Pf.plasmo.db_3.8.2.tar.gz
org.Pt.eg.db_3.8.2.tar.gz
org.Rn.eg.db_3.8.2.tar.gz
org.Sc.sgd.db_3.8.2.tar.gz
org.Ss.eg.db_3.8.2.tar.gz
org.Xl.eg.db_3.8.2.tar.gz
PFAM.db_3.8.2.tar.gz



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