[Bioc-devel] Issue with an illegal version bump message when updating an old experiment data package
Ramos Perez, Marcel
M@rcel@R@mo@Perez @ending from Ro@wellP@rk@org
Wed Sep 26 04:24:29 CEST 2018
Keep in mind that GitHub and the Bioconductor git server are two
You should be pushing your changes to the git server as you would with
packages ( `git using git.bioconductor.org:packages/derfinderData` ).
My guess is that the hook is looking at the version already in the git
comparing that to the committed changes (but I could be wrong).
Nitesh can elaborate a bit more on this.
We will look into it on our end.
On 09/24/2018 10:54 AM, Leonardo Collado Torres wrote:
> Marcel Ramos told me a few months ago (July 24, 2018) that experiment
> data packages are now controlled the same way as software packages via
> GitHub. Today I finally tried synching the repos following these
> instructions http://bioconductor.org/developers/how-to/git/sync-existing-repositories/.
> I had to use the "git merge --allow-unrelated-histories
> upstream/master" step and resolve 3 small conflicts. It's almost all
> working well, the step I'm stuck at is:
> $ git push upstream master
> Counting objects: 45, done.
> Delta compression using up to 4 threads.
> Compressing objects: 100% (38/38), done.
> Writing objects: 100% (45/45), 5.98 KiB | 1.50 MiB/s, done.
> Total 45 (delta 25), reused 5 (delta 4)
> remote: Error: Illegal version bump from '0.115.0' to '0.115.1'. Check
> remote: http://bioconductor.org/developers/how-to/version-numbering/
> remote: for details
> To git.bioconductor.org:packages/derfinderData.git
> ! [remote rejected] master -> master (pre-receive hook declined)
> error: failed to push some refs to
> 'git using git.bioconductor.org:packages/derfinderData.git'
> My guess is that the hook is looking at
> and thinks that I'm trying to bump from 0.103.1 to 0.115.1 while in
> reality the version at
> is 0.115.0 (updated in
> Is there something I can do to make this work?
> GitHub: https://github.com/leekgroup/derfinderData
> Bioc-devel: http://bioconductor.org/packages/devel/data/experiment/html/derfinderData.html
> PS I guess that I don't need this file anymore:
> nor the currently untracked svn files:
> $ git status
> On branch master
> Your branch is up to date with 'origin/master'.
> Untracked files:
> (use "git add <file>..." to include in what will be committed)
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