[Bioc-devel] Issue with 'configure' not being executable

[Thomas Sherman]

Forgot to add, the most recent version of the configure script is in the develop branch, since it was removed from the master branch.


https://github.com/FertigLab/CoGAPS/tree/develop


________________________________
From: Bioc-devel <bioc-devel-bounces using r-project.org> on behalf of Thomas Sherman <tsherma4 using jhu.edu>
Sent: Monday, October 29, 2018 3:15:28 PM
To: bioc-devel using r-project.org
Subject: [Bioc-devel] Issue with 'configure' not being executable


Hello,


The latest build for our package (https://github.com/FertigLab/CoGAPS) failed with the error -


ERROR: 'configure' exists but is not executable -- see the 'R Installation and Administration Manual'


I've run into this before with our CI service, but the issue was fixed there by modifying TMPDIR based on the recommendation here: http://mazamascience.com/WorkingWithData/?p=1185 .


I'm not sure how to fix this issue for the bioconductor build system, so I've temporarily removed the configuration step.


Any help is much appreciated,

Tom



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