[Bioc-devel] Need update access agaisnt package 'banocc'

Thu Oct 18 16:03:58 CEST 2018

Hello,

Seems I have been able to push successfully but I do not see the build
report - Did I do something wrong or am I alooking at the wrong place?
See enclosed screen print

Thanks for your help !

Tanias-MacBook-Air:banocc georgeweingart$ git push origin master

Counting objects: 8, done.

Delta compression using up to 4 threads.

Compressing objects: 100% (8/8), done.

Writing objects: 100% (8/8), 1.02 KiB | 1.02 MiB/s, done.

Total 8 (delta 6), reused 0 (delta 0)

To git.bioconductor.org:packages/banocc

  756f013..9aee576  master -> master

On Thu, Oct 18, 2018 at 5:16 AM Turaga, Nitesh <
Nitesh.Turaga using roswellpark.org> wrote:

> > origin  git using git.bioconductor.org:packages/myPackage.git (fetch)
> > origin  git using git.bioconductor.org:packages/myPackage.git (push)
>
>
>
> Typo in there, its “..org:packages/.."
>
> > On Oct 17, 2018, at 10:47 PM, Turaga, Nitesh
> <Nitesh.Turaga using RoswellPark.org> wrote:
> >
> > Your remotes should look like this,
> >
> > origin  git using git.bioconductor.org/packages/myPackage.git (fetch)
> > origin  git using git.bioconductor.org/packages/myPackage.git (push)
> >
> > Access is through SSH protocol, not HTTPS.
> >
> >       • SSH (developer) read / write access: git using git.bioconductor.org
> >       • HTTPS (public) read only access: https://git.bioconductor.org
> >
> >
> > Please check http://bioconductor.org/developers/how-to/git/.
> >
> > Also, http://bioconductor.org/developers/how-to/git/faq/ (#13).
> >
> > Best,
> >
> > Nitesh
> >
> >
> >> On Oct 17, 2018, at 9:57 PM, George Weingart <george.weingart using gmail.com>
> wrote:
> >>
> >> Hi,
> >>
> >> This is a follow up to Valerie’s response in regards to the permission
> to
> >> update “banocc”
> >>
> >> I am still getting an error message when I am trying to push:
> >>
> >>
> >> Tanias-MacBook-Air:banocc georgeweingart$ git push origin master
> >>
> >> fatal: remote error: FATAL: W any packages/banocc nobody DENIED by
> fallthru
> >>
> >> (or you mis-spelled the reponame)
> >>
> >>
> >> Am I doing something wrong or am I still not permitted to update the
> >> repository ?
> >>
> >> Thanks!
> >>
> >> George Weingart PhD
> >>
> >> Huttenhower Lab
> >>
> >> Harvard School of Public Health
> >>
> >>
> >> DETAILS
> >>
> >> List of remotes
> >>
> >> Tanias-MacBook-Air:banocc georgeweingart$ git remote -v
> >>
> >> origin https://git.bioconductor.org/packages/banocc (fetch)
> >>
> >> origin https://git.bioconductor.org/packages/banocc (push)
> >>
> >> Log of the commits
> >>
> >> Tanias-MacBook-Air:banocc georgeweingart$ git log --oneline
> >>
> >> 9c411f9 (HEAD -> master) Modified DESCRIPTION to update contacts and
> added
> >> parms to enable correct compile using C++11
> >>
> >> 756f013 (origin/master, origin/HEAD) replace BiocInstaller biocLite
> >> mentions with BiocManager
> >>
> >> ef9422a bump x.y.z versions to odd y after creation of RELEASE_3_7
> branch
> >>
> >> d937c6d (origin/RELEASE_3_7) bump x.y.z versions to even y prior to
> >> creation of RELEASE_3_7 branch
> >>
> >> 5cdd6e0 revert commit 63d51b83b60d6656930e0436a42cd606e5ef23b9
> >>
> >> 63d51b8 mark as unsupported on 32-bit windows; the builders only have
> >> 64-bit pandoc
> >>
> >> 7b7f415 bump x.y.z versions to odd y after creation of RELEASE_3_6
> branch
> >>
> >> 40bc005 (origin/RELEASE_3_6) bump x.y.z versions to even y prior to
> >> creation of RELEASE_3_6 branch
> >>
> >> b471035 bump x.y.z versions to odd y after creation of 3_5 branch
> >>
> >> e296cfc bump x.y.z versions to even y prior to creation of 3_5 branch
> >>
> >> 927028f Adding AnnotationFilter, NADfinder, GenomicDataCommons, RIVER,
> >> BioMedR, banocc
> >>
> >>
> >>
> >>
> >> Beginning of the extended log of the commits
> >>
> >> Tanias-MacBook-Air:banocc georgeweingart$ git log
> >>
> >> commit 9c411f9d62abf39cfc1a32cd888a412577463b5c (HEAD -> master)
> >>
> >> Author: George Weingart <george.weingart using gmail.com>
> >>
> >> Date:   Wed Oct 17 18:42:24 2018 -0700
> >>
> >>  Modified DESCRIPTION to update contacts and added parms to enable
> >> correct compile using C++11
> >>
> >> commit 756f0130599144e9ec90e61e84f90a9cec307a94 (origin/master,
> origin/HEAD)
> >>
> >> Author: LiNk-NY <mramos09 using gmail.com>
> >>
> >> Date:   Tue Aug 28 18:51:28 2018 -0400
> >>
> >>  replace BiocInstaller biocLite mentions with BiocManager
> >>
> >> commit ef9422abd0d4e323268c9d807e0a094c9dd07dd6
> >>
> >> Author: vobencha <valerie.obenchain using roswellpark.org>
> >>
> >> Date:   Mon Apr 30 10:41:43 2018 -0400
> >>
> >>  bump x.y.z versions to odd y after creation of RELEASE_3_7 branch
> >>
> >> commit d937c6d2f55d92fd3fbcfa1226c65c260cd47387 (origin/RELEASE_3_7)
> >>
> >> Author: vobencha <valerie.obenchain using roswellpark.org>
> >>
> >> Date:   Mon Apr 30 10:35:46 2018 -0400
> >>
> >>  bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch
> >>
> >>
> >> On Wed, Oct 17, 2018 at 12:21 PM Obenchain, Valerie <
> >> Valerie.Obenchain using roswellpark.org> wrote:
> >>
> >>> Hi George,
> >>>
> >>> Thanks for letting us know - you should now have access.
> >>>
> >>> Valerie
> >>>
> >>>
> >>> On 10/17/18 10:50 AM, George Weingart wrote:
> >>>
> >>> Hello,
> >>>
> >>> The package banocc has a build error - I was given the task to fix it
> and
> >>> update the "Maintainer" information to include me and the head of our
> Lab,
> >>> Prof. Curtis Huttenhower.
> >>>
> >>> The package was developed originally by Emma Schwager who has left our
> Lab.
> >>>
> >>> I cloned the package, made the necessary changes, ran a successful
> BUILD ,
> >>> CHECK, BiocCheck and committed the changes and am ready to push the
> >>> changes,  but I am getting a "permission denied" message - and indeed,
> I
> >>> see in my profile I can update only ccrepe.
> >>>
> >>> I need update access against 'banocc"
> >>>
> >>> Thanks!
> >>>
> >>> George Weingart PhD
> >>>
> >>> Huttenhower Lab
> >>>
> >>> Harvard School of Public Health
> >>>
> >>>     [[alternative HTML version deleted]]
> >>>
> >>> _______________________________________________
> Bioc-devel using r-project.org mailing listhttps://
> stat.ethz.ch/mailman/listinfo/bioc-devel
> >>>
> >>>
> >>>
> >>> This email message may contain legally privileged and/or confidential
> >>> information. If you are not the intended recipient(s), or the employee
> or
> >>> agent responsible for the delivery of this message to the intended
> >>> recipient(s), you are hereby notified that any disclosure, copying,
> >>> distribution, or use of this email message is prohibited. If you have
> >>> received this message in error, please notify the sender immediately by
> >>> e-mail and delete this email message from your computer. Thank you.
> >>
> >>      [[alternative HTML version deleted]]
> >>
> >> _______________________________________________
> >> Bioc-devel using r-project.org mailing list
> >> https://stat.ethz.ch/mailman/listinfo/bioc-devel
> >
> >
> >
> > This email message may contain legally privileged and/or confidential
> information.  If you are not the intended recipient(s), or the employee or
> agent responsible for the delivery of this message to the intended
> recipient(s), you are hereby notified that any disclosure, copying,
> distribution, or use of this email message is prohibited.  If you have
> received this message in error, please notify the sender immediately by
> e-mail and delete this email message from your computer. Thank you.
> > _______________________________________________
> > Bioc-devel using r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/bioc-devel
>
>
>
> This email message may contain legally privileged and/or confidential
> information.  If you are not the intended recipient(s), or the employee or
> agent responsible for the delivery of this message to the intended
> recipient(s), you are hereby notified that any disclosure, copying,
> distribution, or use of this email message is prohibited.  If you have
> received this message in error, please notify the sender immediately by
> e-mail and delete this email message from your computer. Thank you.

-------------- next part --------------
A non-text attachment was scrubbed...
Name: Screen Shot 2018-10-18 at 7.02.44 AM.png
Type: image/png
Size: 227479 bytes
Desc: not available
URL: <https://stat.ethz.ch/pipermail/bioc-devel/attachments/20181018/ba11beeb/attachment.png>