[Bioc-devel] Have trouble in push to master branch

[Zhu, Lihua (Julie)]

Nitesh,
Thanks for fixing the issue! It works now.
Best regards,
Julie

On 10/11/18, 1:55 PM, "Bioc-devel on behalf of Jianhong Ou, Ph.D." <bioc-devel-bounces using r-project.org on behalf of jianhong.ou using duke.edu> wrote:

    Thank you Nitesh,
    
    
    
    It works now.
    
    
    
    Jianhong.
    
    
    
    On 10/11/18, 1:53 PM, "Turaga, Nitesh" <Nitesh.Turaga using RoswellPark.org> wrote:
    
    
    
        Please try now. 
    
        
    
        > On Oct 11, 2018, at 1:48 PM, Zhu, Lihua (Julie) <Julie.Zhu using umassmed.edu> wrote:
    
        > 
    
        > Nitesh,
    
        > 
    
        > I encountered the same issue with CRISPRseek package. Could you please help? Thanks!
    
        > 
    
        > To https://urldefense.proofpoint.com/v2/url?u=http-3A__git.bioconductor.org&d=DwIGaQ&c=WJBj9sUF1mbpVIAf3biu3CPHX4MeRjY_w4DerPlOmhQ&r=3IbW-yoIQpGZOKgd4i2bgmPHhwHHF5gJMlij5cC5bLU&m=Rh4TcF-7dtBYsUoyoYakR6JT33jjesIPuWLpYOe0MTw&s=FQiC3JrYfggdNOkIvKFD1YBWJOwwr2ukBOgSW7K-Ihg&e=:packages/CRISPRseek.git
    
        > ! [remote rejected] master -> master (pre-receive hook declined)
    
        > error: failed to push some refs to 'git using git.bioconductor.org:packages/CRISPRseek.git'
    
        > 
    
        > Best regards,
    
        > 
    
        > Julie
    
        > 
    
        > On 10/11/18, 1:43 PM, "Bioc-devel on behalf of Turaga, Nitesh" <bioc-devel-bounces using r-project.org on behalf of Nitesh.Turaga using RoswellPark.org> wrote:
    
        > 
    
        >    Hi Jianhong,
    
        > 
    
        > 
    
        > 
    
        >    I’m looking into it now. 
    
        > 
    
        > 
    
        > 
    
        >    Nitesh 
    
        > 
    
        > 
    
        > 
    
        >> On Oct 11, 2018, at 1:35 PM, Jianhong Ou, Ph.D. <jianhong.ou using duke.edu> wrote:
    
        > 
    
        >> 
    
        > 
    
        >> Hi,
    
        > 
    
        >> 
    
        > 
    
        >> I am trying to fix bug in my package. However, I got declined message:
    
        > 
    
        >> 
    
        > 
    
        >> 
    
        > 
    
        >> git push upstream master
    
        > 
    
        >> 
    
        > 
    
        >> Counting objects: 38, done.
    
        > 
    
        >> 
    
        > 
    
        >> Delta compression using up to 8 threads.
    
        > 
    
        >> 
    
        > 
    
        >> Compressing objects: 100% (26/26), done.
    
        > 
    
        >> 
    
        > 
    
        >> Writing objects: 100% (38/38), 6.16 KiB | 3.08 MiB/s, done.
    
        > 
    
        >> 
    
        > 
    
        >> Total 38 (delta 30), reused 16 (delta 12)
    
        > 
    
        >> 
    
        > 
    
        >> remote: Traceback (most recent call last):
    
        > 
    
        >> 
    
        > 
    
        >> remote:   File "hooks/pre-receive.h00-pre-receive-hook-software", line 104, in <module>
    
        > 
    
        >> 
    
        > 
    
        >> remote:     hooks_dict = read_bioc_conf(conf)
    
        > 
    
        >> 
    
        > 
    
        >> remote:   File "hooks/pre-receive.h00-pre-receive-hook-software", line 60, in read_bioc_conf
    
        > 
    
        >> 
    
        > 
    
        >> remote:     for hook in d[package]:
    
        > 
    
        >> 
    
        > 
    
        >> remote: KeyError: 'Package: NADfinder'
    
        > 
    
        >> 
    
        > 
    
        >> To https://urldefense.proofpoint.com/v2/url?u=http-3A__git.bioconductor.org&d=DwIGaQ&c=WJBj9sUF1mbpVIAf3biu3CPHX4MeRjY_w4DerPlOmhQ&r=3IbW-yoIQpGZOKgd4i2bgmPHhwHHF5gJMlij5cC5bLU&m=ldl4cdibkRktwLiyZ6niwklGYISVFGeXm27fs_BVZbo&s=X0WooCCk3_DxndJDvyJOOlMSACg6AVEER4VTQcjlcEw&e=:packages/NADfinder.git
    
        > 
    
        >> 
    
        > 
    
        >> ! [remote rejected] master -> master (pre-receive hook declined)
    
        > 
    
        >> 
    
        > 
    
        >> error: failed to push some refs to 'git using git.bioconductor.org:packages/NADfinder.git'
    
        > 
    
        >> 
    
        > 
    
        >> How could I fix this? Thank you for your help.
    
        > 
    
        >> 
    
        > 
    
        >> Yours Sincerely,
    
        > 
    
        >> 
    
        > 
    
        >> Jianhong Ou
    
        > 
    
        >> 
    
        > 
    
        >> Email: jianhong.ou using duke.edu<mailto:jianhong.ou using duke.edu>
    
        > 
    
        >> Bioinformatician II
    
        > 
    
        >> Department of Cell Biology
    
        > 
    
        >> Duke University School of Medicine
    
        > 
    
        >> Durham, NC, 27710
    
        > 
    
        >> 
    
        > 
    
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