[Bioc-devel] Rstudio returns fail for package check

Arman Shahrisa @h@hri@@@@rm@n @ending from hotm@il@com
Mon Oct 1 13:17:03 CEST 2018

Hi Felix,

Thank you very much for mentioning that.
As you have guessed, I�m on windows.
Installing the version 6.0.1 should fix the issue.
Thanks again.


From: Felix Ernst<mailto:felix.ernst using ulb.ac.be>
Sent: Monday, October 1, 2018 12:41
To: 'Arman Shahrisa'<mailto:shahrisa.arman using hotmail.com>
Subject: RE: [Bioc-devel] Rstudio returns fail for package check

Hi Arman,

I suppose you are using a Windows system?

If yes, rollback to roxygen2 version 6.0.1 using the install_version
function of devtools.

Version 6.1.0 apparently has a bug on windows:

It is fixed on the github branch, but has not hit CRAN yet as fas as I know.

Kind regards,

Felix Ernst, PhD
Universit� Libre de Bruxelles
BIOPARK Charleroi Brussels-South CAMPUS
Rue Profs Jeener & Brachet, 12
B-6041 Charleroi - Gosselies
+32(2)650 9774 (office phone)
felix.ernst using ulb.ac.be

-----Original Message-----
From: Bioc-devel <bioc-devel-bounces using r-project.org> On Behalf Of Arman
Sent: Sonntag, 30. September 2018 21:33
To: bioc-devel <bioc-devel using r-project.org>
Subject: [Bioc-devel] Rstudio returns fail for package check

Hi every one,

I have a problem with my package check in Rstudio.
I have no idea what might be causing the problem.
I would be grateful if someone could help.

==> devtools::check()

Updating cbaf documentation

Loading cbaf

Error in file(con, "r") : cannot open the connection

Calls: <Anonymous> ... parse_package -> lapply -> FUN -> read_lines ->
<Anonymous> -> file

In addition: Warning message:

In file(con, "r") :

  cannot open file 'Z:\cbaf\Source\cbaf\R': Permission denied

Execution halted

Exited with status 1.

Best regards,

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