[Bioc-devel] Ask help to install gs tokay2 build/check

Obenchain, Valerie V@lerie@Obench@in @ending from Ro@wellP@rk@org
Fri Nov 2 20:03:27 CET 2018

Hi Jianhong,

Ghostscript is already installed on the builders.

On the Nov 1 build report for Bioc 3.9, motifStack is clean on tokay2 
(Windows) but failed on malbec2 (Linux). There were other packages that 
depended on grImports with similar errors on Linux - dagLogo and 

I went on the Linux builder to investigate and was able to build and 
check motifStack with no problem. I also saw the build results for today 
(Nov 2) and motifStack is clean so I'm not sure what happened in the 
previous day's builds.

The build report for today, Nov 2, should post within the next hour and 
motifStack should be green.


On 11/2/18 6:05 AM, Jianhong Ou, Ph.D. wrote:
> My package motifStack import grImport which is depend on ghostscript.
> Jianhong.
> From: Kasper Daniel Hansen <kasperdanielhansen using gmail.com>
> Date: Friday, November 2, 2018 at 8:55 AM
> To: "Jianhong Ou, Ph.D." <jianhong.ou using duke.edu>
> Cc: bioc-devel <bioc-devel using r-project.org>
> Subject: Re: [Bioc-devel] Ask help to install gs tokay2 build/check
> Perhaps explain why
> On Fri, Nov 2, 2018 at 8:19 AM Jianhong Ou, Ph.D. <jianhong.ou using duke.edu<mailto:jianhong.ou using duke.edu>> wrote:
> Hi,
> Is it possible to install ghostscript in tokay2 for development package build?
> Yours Sincerely,
> Jianhong Ou
> Email: jianhong.ou using duke.edu<mailto:jianhong.ou using duke.edu><mailto:jianhong.ou using duke.edu<mailto:jianhong.ou using duke.edu>>
> Bioinformatician II
> Department of Cell Biology
> Duke University School of Medicine
> Durham, NC, 27710
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