[Bioc-devel] Build time-out on malbec1

Nicolas Delhomme nicol@@@delhomme @ending from umu@@e
Thu May 17 14:58:09 CEST 2018


Hej Lori!

Indeed. Thanks for answering though. Now, it seems to be an error propagating through from biomaRt, so I'll wait for that to be fixed.

Best,

Nico

---------------------------------------------------------------
Nicolas Delhomme, PhD

UPSC bioinformatics facility Manager
Umeå Plant Science Center,
Swedish University for Agricultural 
Sciences (SLU) and Umeå University

Tel: +46 90 786 5478
Email: nicolas.delhomme at umu.se
SLU - Umeå universitet
Umeå S-901 87 Sweden
www.slu.se/framtidiskogen
---------------------------------------------------------------

> On 17 May 2018, at 13:51, Shepherd, Lori <Lori.Shepherd at RoswellPark.org> wrote:
> 
> It looks like this was resolved -  The ERRORs on the report are now with coding and not Timeouts. 
> 
> Lori Shepherd
> Bioconductor Core Team
> Roswell Park Cancer Institute
> Department of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
> From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Nicolas Delhomme <nicolas.delhomme at umu.se>
> Sent: Monday, May 14, 2018 3:57:30 AM
> To: bioc-devel at r-project.org
> Subject: [Bioc-devel] Build time-out on malbec1
>  
> Hej!
> 
> I get this error on the build page for easyRNASeq on malbec1:
> 
> Error: processing vignette 'simpleRNASeq.Rmd' failed with diagnostics:
> Timeout was reached: Operation timed out after 0 milliseconds with 0 out of 0 bytes received
> 
> Any idea what is causing this?
> 
> Thanks,
> 
> Nico
> 
> ---------------------------------------------------------------
> Nicolas Delhomme, PhD
> 
> UPSC bioinformatics facility Manager
> Umeå Plant Science Center,
> Swedish University for Agricultural 
> Sciences (SLU) and Umeå University
> 
> Tel: +46 90 786 5478
> Email: nicolas.delhomme at umu.se
> SLU - Umeå universitet
> Umeå S-901 87 Sweden
> www.slu.se/framtidiskogen
> ---------------------------------------------------------------
> 
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