[Bioc-devel] Suggested edits to support site posting guide

Hervé Pagès hpages at fredhutch.org
Tue May 1 08:43:01 CEST 2018


Thanks Leo for the link to April Wensel's blog.

I wonder if she is 100% serious with her rant about the Grandma
thing but I found it pretty funny!

H.


On 04/30/2018 01:16 PM, Michael Love wrote:
> hi Leo,
> 
> We currently have "Rudeness and ad hominem comments are not
> acceptable" in the section on replying. This is nice and simple.
> 
> I think most of the people reading the guide will be first time
> question-askers, but I'm glad we have the above bulletpoint so we can
> say someone was breaking the site guidelines if they were rude.
> 
> I don't think we need to link to the anti-RTFM piece, because I don't
> think I've ever seen that phrase used on Bioc support (or if I saw it,
> it was a while ago and I forgot about it). If you want to incorporate
> any of the positive suggestions from there to the section on replying
> go for it.
> 
> Anyone should feel free to keep editing the Gdoc. I'll wait a week or
> so and then do a PR to the site.
> 
> best,
> Mike
> 
> 
> On Mon, Apr 30, 2018 at 3:30 PM, Tim Triche, Jr. <tim.triche at gmail.com> wrote:
>> well, Hadley usually walks people through the steps required to 1) file a
>> bug reproducibly or 2) learn how to do the thing in question organically,
>> and his universe is doing OK, so N=1 in favor of that approach.  Also a lot
>> of people helped me learning Perl (!) on Usenet (!!!) so yeah I'm old but
>> it seems like civility was once a little more common.  Bioc-devel and
>> support.bioconductor.com are healthy communities, I would hope that nobody
>> minds this being spelled out explicitly.
>>
>> I love Prof Ripley and he's never been anything but nice to me, still,
>> r-help's reputation took a beating from his insistence on self-reliance.
>> Several times when I thought I understood a library or process, I'd write
>> up an example and discover that what I believed to be true was not, in
>> fact, true -- perhaps an example was cordoned off with \{dontrun} or some
>> such, perhaps an upstream package broke unwritten assumptions, whatever.
>> My point is that it can be beneficial for the answerer as for the asker,
>> and perhaps if one does not have time to provide a working example in an
>> answer, then it might be better to let another person with sufficient time
>> go ahead and address that question.
>>
>> JMHO, since you asked "everyone else".
>>
>> Best,
>>
>>
>> --t
>>
>> On Mon, Apr 30, 2018 at 2:58 PM, Leonardo Collado Torres <lcollado at jhu.edu>
>> wrote:
>>
>>> Hi Mike, Lori and everyone else,
>>>
>>> I recently saw this tweet
>>> https://urldefense.proofpoint.com/v2/url?u=https-3A__twitter.com_aprilwensel_status_989248246878035972&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=S5D7QD263pcF-j96zEV-sY0v_ulBJ_ZpI9JMXcbAEOI&s=-p8hKcFjc_9ArMb2xpIHzDt9ZrOm5Ojtf4XrEmnC5tw&e= that links
>>> to https://urldefense.proofpoint.com/v2/url?u=https-3A__medium.com_compassionate-2Dcoding_its-2Dtime-2D&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=S5D7QD263pcF-j96zEV-sY0v_ulBJ_ZpI9JMXcbAEOI&s=tqcYe_NWBZlekYGeTonoXkxgnYpjk14j_DFWw0yVcRk&e=
>>> to-retire-rtfm-31acdfef654f#---0-162
>>>
>>> First, I'm curious if you've read it and if you like it. Second, maybe
>>> we could include some of it (or link to it) in the suggested changes
>>> to the posting guide that Mike is working on.
>>>
>>> Best,
>>> Leo
>>>
>>>
>>>
>>> On Fri, Apr 20, 2018 at 10:10 AM, Shepherd, Lori
>>> <Lori.Shepherd at roswellpark.org> wrote:
>>>> May I also suggested when you are satisfied with user feedback and
>>> alterations to create a pull request for the website repository
>>>>
>>>>
>>>> https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_Bioconductor_bioconductor.org&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=S5D7QD263pcF-j96zEV-sY0v_ulBJ_ZpI9JMXcbAEOI&s=lDZRqONtpk4hTnHzIpBY0FHTUu2Y8-fCZ9-kechwRKI&e=
>>>>
>>>>
>>>>
>>>>
>>>> Lori Shepherd
>>>>
>>>> Bioconductor Core Team
>>>>
>>>> Roswell Park Cancer Institute
>>>>
>>>> Department of Biostatistics & Bioinformatics
>>>>
>>>> Elm & Carlton Streets
>>>>
>>>> Buffalo, New York 14263
>>>>
>>>> ________________________________
>>>> From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of
>>> Michael Love <michaelisaiahlove at gmail.com>
>>>> Sent: Thursday, April 12, 2018 11:23:35 AM
>>>> To: bioc-devel
>>>> Subject: [Bioc-devel] Suggested edits to support site posting guide
>>>>
>>>> dear all,
>>>>
>>>> I've edited the text from the posting guide
>>>> <https://urldefense.proofpoint.com/v2/url?u=http-3A__www.bioconductor.org_help_support_posting-2Dguide_&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=S5D7QD263pcF-j96zEV-sY0v_ulBJ_ZpI9JMXcbAEOI&s=4NMQpCXfazPlsIzz4y0aJDeOyaHgH83K6rGiirye0Ps&e=> to update it a
>>>> bit.
>>>>
>>>> For example, some of the text still referred to the mailing list
>>>> :
>>>> "Compose a new message with a new subject line".
>>>>
>>>> Mostly, though, I wanted to emphasize posting all of their R code and
>>>> information about the experiment, which is often missing from support
>>> site
>>>> posts. The self-contained example with data and code is rarely possible
>>>> because many Bioc users have large datasets that can't be shared.
>>>>
>>>> Curious if this is useful or if others have suggestions. The following
>>>> link allows edits:
>>>>
>>>> https://urldefense.proofpoint.com/v2/url?u=https-3A__docs.google.com_document_d_1baiBUYB8E02KMbaojjoo-2D&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=S5D7QD263pcF-j96zEV-sY0v_ulBJ_ZpI9JMXcbAEOI&s=b6dghZFuzEt_8azoY3GVoQn3k6G9Emd8wXXj5KOr6kU&e=
>>>> tKV3Ctd9sA5lVCvwFIWquA/edit?usp=sharing
>>>>
>>>> best,
>>>> Mike
>>>>
>>>>          [[alternative HTML version deleted]]
>>>>
>>>> _______________________________________________
>>>> Bioc-devel at r-project.org mailing list
>>>> https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=S5D7QD263pcF-j96zEV-sY0v_ulBJ_ZpI9JMXcbAEOI&s=chTCvAJdVNlm_YsDjNRIrvNNptfOmOK0yc5mLpWzIkQ&e=
>>>>
>>>>
>>>> This email message may contain legally privileged and/or confidential
>>> information.  If you are not the intended recipient(s), or the employee or
>>> agent responsible for the delivery of this message to the intended
>>> recipient(s), you are hereby notified that any disclosure, copying,
>>> distribution, or use of this email message is prohibited.  If you have
>>> received this message in error, please notify the sender immediately by
>>> e-mail and delete this email message from your computer. Thank you.
>>>>          [[alternative HTML version deleted]]
>>>>
>>>> _______________________________________________
>>>> Bioc-devel at r-project.org mailing list
>>>> https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=S5D7QD263pcF-j96zEV-sY0v_ulBJ_ZpI9JMXcbAEOI&s=chTCvAJdVNlm_YsDjNRIrvNNptfOmOK0yc5mLpWzIkQ&e=
>>>
>>> _______________________________________________
>>> Bioc-devel at r-project.org mailing list
>>> https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=S5D7QD263pcF-j96zEV-sY0v_ulBJ_ZpI9JMXcbAEOI&s=chTCvAJdVNlm_YsDjNRIrvNNptfOmOK0yc5mLpWzIkQ&e=
>>>
>>
>>          [[alternative HTML version deleted]]
>>
>> _______________________________________________
>> Bioc-devel at r-project.org mailing list
>> https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=S5D7QD263pcF-j96zEV-sY0v_ulBJ_ZpI9JMXcbAEOI&s=chTCvAJdVNlm_YsDjNRIrvNNptfOmOK0yc5mLpWzIkQ&e=
> 
> _______________________________________________
> Bioc-devel at r-project.org mailing list
> https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=S5D7QD263pcF-j96zEV-sY0v_ulBJ_ZpI9JMXcbAEOI&s=chTCvAJdVNlm_YsDjNRIrvNNptfOmOK0yc5mLpWzIkQ&e=
> 

-- 
Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M1-B514
P.O. Box 19024
Seattle, WA 98109-1024

E-mail: hpages at fredhutch.org
Phone:  (206) 667-5791
Fax:    (206) 667-1319



More information about the Bioc-devel mailing list