[Bioc-devel] Questions about tokay2 and import 'grDevices::windows' versus 'IRanges::windows'

Martin, Tiphaine tiphaine.martin at kcl.ac.uk
Thu Mar 1 21:59:33 CET 2018


thanks, I am going to do that.

Best,

Tiphaine

________________________________
From: Martin Morgan <martin.morgan at roswellpark.org>
Sent: 01 March 2018 20:56:10
To: Martin, Tiphaine; bioc-devel at r-project.org
Subject: Re: [Bioc-devel] Questions about tokay2 and import 'grDevices::windows' versus 'IRanges::windows'



On 03/01/2018 09:32 AM, Martin, Tiphaine wrote:
> hi,
>
>
> I have a warning under windows (tokay2) for my devel version of my package (coMET). I am not sure how to answer it:
>
>
> * checking whether package 'coMET' can be installed ... WARNING
> Found the following significant warnings:
>    Warning: replacing previous import 'grDevices::windows' by 'IRanges::windows' when loading 'coMET'
> > I am not sure that IRanges::windows is equal to
>
> 'grDevices::windows'. I don't have this error message under linux or MacOS.

use

   import(grDevices, except = 'windows')

in the NAMESPACE file, or similar approaches to restrict the symbols
imported to those you  want. See


https://emea01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fcran.r-project.org%2Fdoc%2Fmanuals%2Fr-devel%2FR-exts.html%23Specifying-imports-and-exports&data=01%7C01%7Ctiphaine.martin%40kcl.ac.uk%7C64a7531422854f01d6ba08d57fb6e710%7C8370cf1416f34c16b83c724071654356%7C0&sdata=EVDDGRdSFnlepjgy4SVzjrmKjH0yeTysAoMUQRi3MiA%3D&reserved=0

Martin

>
>
> I will be happy to have some advices about that.
>
> Best,
>
> tiphaine
>
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