[Bioc-devel] Bioconductor package update

Martin Morgan m@rtin@morg@n @ending from ro@wellp@rk@org
Sat Jun 30 17:32:06 CEST 2018

(cc'ing bioc-devel, where questions like this should be posted so other 
developers can benefit / contribute)

I see

commit 5fea2c1f2e0f3407cb6804db638b565e0a2ea5dd
Author: Ahrim Youn <youna using mlg-jgm164.local.jax.org>
Date:   Fri Jun 22 16:34:02 2018 -0400

     update version number

  DESCRIPTION          |  2 +-
  R/library_function.r | 12 ++++++------
  2 files changed, 7 insertions(+), 7 deletions(-)

where you changed the R/ file roxygen comment but did not regenerate the 
documentation, I guess with


The build system does not do this for you. So Update the man/ files and 
bump the version.


On 06/30/2018 10:55 AM, Ahrim Youn wrote:
> Hi,
> I’m a maintainer of the package BiFET and I’m having a problem in 
> changing the manual of the package :
> http://bioconductor.org/packages/devel/bioc/manuals/BiFET/man/BiFET.pdf
> I changed the comments in the main R function which is linked to the 
> manual, and updated it to both github and biocondutor, but the manual 
> pdf file does not change.
>   What is interesting is that the Vignette which I also updated is 
> updating according to my change :
> http://bioconductor.org/packages/devel/bioc/vignettes/BiFET/inst/doc/BiFET.html
> Do you know why the manual pdf file does not update?
> Thanks for your help!
> Best,
> Ahrim
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