[Bioc-devel] BiocManager to install Depends/Imports/Suggests
Levi Waldron
lw@ldron@re@e@rch @ending from gm@il@com
Mon Jul 9 10:51:59 CEST 2018
It would be useful to be able to use BiocManager to install
the Depends/Imports/Suggests of a source package not on Bioconductor, e.g.:
BiocManager::install("Bioconductor/BiocWorkshops") #works but only if all
Depends/Imports are already installed
or:
BiocManager::install_deps("Bioconductor/BiocWorkshops") #to avoid any
change to BiocManager::install()
BiocManager::install("Bioconductor/BiocWorkshops") #recommends the above
if not all deps are available
Also from a local package, e.g.:
BiocManager::install("mypackage_0.1.tar.gz") # or,
BiocManager::install("mypackage")
BiocManager::install_deps("mypackage_0.1.tar.gz") # or,
BiocManager::install_deps("mypackage")
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