[Bioc-devel] segfaults in findOverlaps()

Hervé Pagès hpages at fredhutch.org
Mon Jan 8 19:35:18 CET 2018

Hi developers,

Just a heads up that last week I made a change in S4Vectors that
broke findOverlaps(). The failure is a segfault that occur during
calls to findOverlaps() e.g.


Many packages are affected.

This morning I fixed the problem in IRanges 2.13.5. This new
version won't be available via biocLite() before tomorrow though.
In the meantime you can grab and install it directly from git.

Sorry for the inconvenience,

Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M1-B514
P.O. Box 19024
Seattle, WA 98109-1024

E-mail: hpages at fredhutch.org
Phone:  (206) 667-5791
Fax:    (206) 667-1319

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