[Bioc-devel] Problem with GenomicFeatures::extractTranscriptSeqs

Rainer Johannes Johannes.Rainer at eurac.edu
Thu Feb 8 20:34:41 CET 2018

Dear all,

one of the unit tests in ensembldb is failing because of a problem in GenomicFeatures::extractTranscriptSeqs (I guess):

bsg <- BSgenome.Hsapiens.NCBI.GRCh38

all <- extractTranscriptSeqs(bsg, EnsDb.Hsapiens.v86)
Error in (function (classes, fdef, mtable)  : 
  unable to find an inherited method for function 'narrow' for signature '"DNAStringSet"'

Have there been any recent changes?

thanks, jo

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