[Bioc-devel] Problem with GenomicFeatures::extractTranscriptSeqs

[Rainer Johannes]

Dear all,

one of the unit tests in ensembldb is failing because of a problem in GenomicFeatures::extractTranscriptSeqs (I guess):

library(BSgenome.Hsapiens.NCBI.GRCh38)
bsg <- BSgenome.Hsapiens.NCBI.GRCh38
library(EnsDb.Hsapiens.v86)

all <- extractTranscriptSeqs(bsg, EnsDb.Hsapiens.v86)
Error in (function (classes, fdef, mtable)  : 
  unable to find an inherited method for function 'narrow' for signature '"DNAStringSet"'

Have there been any recent changes?

thanks, jo