[Bioc-devel] Help with class lost after subsetting.
ch@rle@-li@te@+bioc-devel @ending from ple@@y@org
Tue Aug 28 06:19:34 CEST 2018
Dear Bioconductor developers,
In the CAGEr package, I created a "CAGEexp" class that extends
"MultiAssayExperiment" without adding new slots, in order to define generic
functions that require CAGEr-specific contents in the colData slot.
Unfortunately, when run in the development branch of Bioconductor,
the CAGEexp objects lose their class when they are subsetted. Here
is an example:
A CAGEexp object of 4 listed
A MultiAssayExperiment object of 4 listed
This breaks examples in the package, as well as existing code.
I am lost on how to troubleshoot this. May I ask for your help ?
Charles Plessy - - ~ ~ ~ ~ ~ ~~~~ ~ ~ ~ ~ ~ - - charles.plessy using oist.jp
Okinawa Institute of Science and Technology Graduate University
Staff scientist in the Luscombe Unit - ~ - https://groups.oist.jp/grsu
Toots from work - ~ ~~ ~ - https://mastodon.technology/@charles_plessy
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