[Bioc-devel] Process to rename a bioconductor package

[Turaga, Nitesh]

Hi Adrian,

I’ve changed your package name from roma to “OmaDB”. 

You should change your GitHub repo’s name as well "https://github.com/klarakaleb/roma” —> https://github.com/klarakaleb/OmaDB. 

You can do this by, https://github.com/klarakaleb/roma/settings, and there will be an option to rename your repository.

Best,

Nitesh 

> On Apr 26, 2018, at 10:50 AM, Adrian Altenhoff <adrian.altenhoff at inf.ethz.ch> wrote:
> 
> Dear Lori,
> 
> 
> thanks for helping with this. We appreciate your concern about the
> ambiguity of the name. In our opinion the best option would be to rename
> it to 'OmaDB' to emphases both OMA and the fact that it queries a database.
> 
> We would be very glad if you could initiate the process for rename then.
> 
> 
> Best wishes & thanks for your help again!
> 
> Adrian
> 
> 
> On 23/04/18 13:50, Shepherd, Lori wrote:
>> 
>> We can assist we renaming - 
>> 
>> 
>> However - we would not recommend "oma"  as that is also rather short
>> and ambiguous, especially considering that is the
>> exact abbreviated name of the database your package accesses - 
>> 
>> 
>> Could you come up with perhaps a more unambigious and meaningful name?  
>> 
>> 
>> for example here are some existing rest api for databases:
>> 
>> KEGGREST : Client-side REST access to KEGG
>> 
>> goTools:  Functions for Gene Ontology database
>> 
>> IMPCdata:  Retrieves data from IMPC database
>> InterMineR:  R Interface with InterMine-Powered Databases
>> 
>> BgeeDB:  Annotation and gene expression data retrieval from Bgee database
>> 
>> 
>> maybe something along those lines? 
>> 
>> 
>> 
>> 
>> Lori Shepherd
>> 
>> Bioconductor Core Team
>> 
>> Roswell Park Cancer Institute
>> 
>> Department of Biostatistics & Bioinformatics
>> 
>> Elm & Carlton Streets
>> 
>> Buffalo, New York 14263
>> 
>> ------------------------------------------------------------------------
>> *From:* Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of
>> Adrian Altenhoff <adrian.altenhoff at inf.ethz.ch>
>> *Sent:* Thursday, April 19, 2018 4:37:07 PM
>> *To:* bioc-devel at r-project.org
>> *Subject:* [Bioc-devel] Process to rename a bioconductor package
>>  
>> Dear all,
>> 
>> we would like to rename or own bioconductor package 'roma' --> 'oma' (as
>> there exists another software tool with that name that could be
>> misleading). So far the package is only in the development version. Is
>> there a standard process how to proceed with such requests?
>> 
>> Thanks!
>> Adrian
>> 
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