[Bioc-devel] Unable to push to origin master

Giorgio Melloni melloni.giorgio at gmail.com
Tue Apr 24 01:26:29 CEST 2018


No I only get the error on GitHub but not on on Bioconductor upstream. I guess it’s not that important but in case others have the same problem it would be nice to know.

Giorgio

> On Apr 23, 2018, at 19:18, Turaga, Nitesh <Nitesh.Turaga at RoswellPark.org> wrote:
> 
> Hi Giorgio,
> 
> This is an issue with Github. They have a pre-receive hook on Github’s end which is being triggered. Do you get the same error message when you push to Bioconductor (upstream)? (git push upstream master)
> 
> I’m not sure why you are getting an error with that .rb (ruby) extension.
> 
> Your remotes are set up correct.  
> 
> Best,
> 
> Nitesh 
> 
> 
>> On Apr 16, 2018, at 2:10 PM, Giorgio Melloni <melloni.giorgio at gmail.com> wrote:
>> 
>> Dear Bioc-Devel,
>> 
>> I’ve just updated my package for the upcoming release upstream successfully using "git push upstream master”.
>> My current remotes are set to:
>> 
>> origin	https://github.com/gmelloni/LowMACA.git (fetch)
>> origin	https://github.com/gmelloni/LowMACA.git (push)
>> upstream	git at git.bioconductor.org:packages/LowMACA.git (fetch)
>> upstream	git at git.bioconductor.org:packages/LowMACA.git (push)
>> 
>> 
>> When I try to do the same to origin (git push origin master) I receive the following error:
>> 
>> Counting objects: 18, done.
>> Delta compression using up to 8 threads.
>> Compressing objects: 100% (16/16), done.
>> Writing objects: 100% (18/18), 8.16 KiB | 2.72 MiB/s, done.
>> Total 18 (delta 8), reused 0 (delta 0)
>> remote: Resolving deltas: 100% (8/8), completed with 6 local objects.
>> remote: /data/github/releases/deploy-b/vendor/gems/2.4.2/ruby/2.4.0/gems/statsd-ruby-0.3.0.github.3.38.gd478cc7/lib/github/statsd.rb:23:in `ip': getaddrinfo: Name or service not known (SocketError)
>> remote: 	from /data/github/releases/deploy-b/vendor/gems/2.4.2/ruby/2.4.0/gems/statsd-ruby-0.3.0.github.3.38.gd478cc7/lib/github/statsd.rb:23:in `initialize'
>> remote: 	from /data/github/releases/deploy-b/vendor/gems/2.4.2/ruby/2.4.0/gems/statsd-ruby-0.3.0.github.3.38.gd478cc7/lib/github/statsd.rb:106:in `new'
>> remote: 	from /data/github/releases/deploy-b/vendor/gems/2.4.2/ruby/2.4.0/gems/statsd-ruby-0.3.0.github.3.38.gd478cc7/lib/github/statsd.rb:106:in `add_shard'
>> remote: 	from /data/github/releases/deploy-b/lib/github/config/stats.rb:33:in `block in create_statsd'
>> remote: 	from /data/github/releases/deploy-b/lib/github/config/stats.rb:33:in `each'
>> remote: 	from /data/github/releases/deploy-b/lib/github/config/stats.rb:33:in `create_statsd'
>> remote: 	from /data/github/releases/deploy-b/lib/github/config/stats.rb:20:in `stats'
>> remote: 	from /data/github/releases/deploy-b/lib/github/config/stats.rb:244:in `<module:GitHub>'
>> remote: 	from /data/github/releases/deploy-b/lib/github/config/stats.rb:12:in `<top (required)>'
>> remote: 	from /data/github/releases/deploy-b/config/basic.rb:66:in `require'
>> remote: 	from /data/github/releases/deploy-b/config/basic.rb:66:in `require'
>> remote: 	from /data/github/releases/deploy-b/lib/github/logger.rb:3:in `<top (required)>'
>> remote: 	from /data/github/releases/deploy-b/config/basic.rb:66:in `require'
>> remote: 	from /data/github/releases/deploy-b/config/basic.rb:66:in `require'
>> remote: 	from /data/github/releases/deploy-b/lib/github.rb:137:in `<module:GitHub>'
>> remote: 	from /data/github/releases/deploy-b/lib/github.rb:20:in `<top (required)>'
>> remote: 	from /data/github/releases/deploy-b/config/basic.rb:66:in `require'
>> remote: 	from /data/github/releases/deploy-b/config/basic.rb:66:in `require'
>> remote: 	from /data/github/releases/deploy-b/config/basic.rb:230:in `<top (required)>'
>> remote: 	from /data/github/releases/deploy-b/vendor/ruby/44c51a28900fc53699489c87289294b79ee365d3/lib/ruby/2.4.0/rubygems/core_ext/kernel_require.rb:55:in `require'
>> remote: 	from /data/github/releases/deploy-b/vendor/ruby/44c51a28900fc53699489c87289294b79ee365d3/lib/ruby/2.4.0/rubygems/core_ext/kernel_require.rb:55:in `require'
>> To https://github.com/gmelloni/LowMACA.git
>> ! [remote rejected] master -> master (pre-receive hook declined)
>> error: failed to push some refs to 'https://github.com/gmelloni/LowMACA.git’
>> 
>> I’ve probably set up the remotes in the wrong way. Any help is appreciated.
>> 
>> thanks
>> 
>> Giorgio
>> 
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> 
> 
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