[Bioc-devel] Bioconductor Git Access: GateFinder

Turaga, Nitesh Nitesh.Turaga at RoswellPark.org
Fri Apr 13 20:52:36 CEST 2018


Hi Tony,

Another thing, I checked your Github repo. Please do not push a commit like this to upstream, "test commit: changing name and pushing to test upstream access”.

The Bioconductor version of the repo is canonical. You cannot go back in time on that repo. You can test upstream access by using `ssh -T git at git.bioconductor.org`.

Best,

Nitesh


> On Apr 13, 2018, at 2:43 PM, Turaga, Nitesh <Nitesh.Turaga at RoswellPark.org> wrote:
> 
> Hi Tony,
> 
> You don’t have access to that package. I’ve checked the package DESCRIPTION and there is no record of you. Please ask the authors for access to the package. 
> 
> Author: Nima Aghaeepour <naghaeep at gmail.com>, Erin F. Simonds <erin.simonds at gmail.com>
> Maintainer: Nima Aghaeepour <naghaeep at gmail.com>
> 
> Copy bioc-devel on the email where you ask the authors for permission. It is always easier to contribute to their Github repo. 
> 
> Best,
> 
> Nitesh 
> 
>> On Apr 13, 2018, at 2:30 PM, Tony Culos <tonyculos at gmail.com> wrote:
>> 
>> I've changed it to SSH but still do not have write access to GateFinder 
>> 
>> git remote -v
>> origin	git at github.com:Teculos/GateFinder.git (fetch)
>> origin	git at github.com:Teculos/GateFinder.git (push)
>> upstream	git at git.bioconductor.org:packages/GateFinder.git (fetch)
>> upstream	git at git.bioconductor.org:packages/GateFinder.git (push)
>> 
>> ssh -T git at git.bioconductor.org command lists all packages as read only
>> 
>> On Fri, Apr 13, 2018 at 10:59 AM, Turaga, Nitesh <Nitesh.Turaga at roswellpark.org> wrote:
>> You are using the HTTPS protocol instead of SSH. Please refer to http://bioconductor.org/developers/how-to/git/faq/ (#13). Your upstream should look like “git at git.bioconductor.org:packages/GateFinder.git”.
>> 
>> 
>> Nitesh 
>> 
>> 
>> 
>>> On Apr 13, 2018, at 1:44 PM, Tony Culos <tonyculos at gmail.com> wrote:
>>> 
>>> Hello,
>>> 
>>> I recently received an email from maintainer at bioconductor.org saying that I
>>> have access to the GateFinder package however when I try the command "git
>>> push upstream master", I receive the error:
>>> 
>>> fatal: remote error: FATAL: W any packages/GateFinder nobody DENIED by
>>> fallthru
>>> (or you mis-spelled the reponame)
>>> 
>>> Also the results for "git remote -v" are:
>>> 
>>> origin https://github.com/Teculos/GateFinder.git (fetch)
>>> origin https://github.com/Teculos/GateFinder.git (push)
>>> upstream https://git.bioconductor.org/packages/GateFinder (fetch)
>>> upstream https://git.bioconductor.org/packages/GateFinder (push)
>>> 
>>> Thank You,
>>> Tony C.
>>> 
>>>      [[alternative HTML version deleted]]
>>> 
>>> _______________________________________________
>>> Bioc-devel at r-project.org mailing list
>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>> 
>> 
>> 
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