[Bioc-devel] Hsapiens in bioconductor

Tomasz Stokowy tomasz.stokowy at k2.uib.no
Thu Sep 14 18:47:36 CEST 2017

Dear Herve,

Your solution worked out, no 'R CMD check' warning.


On Thu, 14 Sep 2017 18:09:44 +0200, <bioc-devel-request at r-project.org>  

> Hi Tomasz,
> The name of the BSgenome object defined in a BSgenome data package
> is the name of the package itself. Hsapiens is just an convenient
> "alias" for the long name. So you could do:
> importFrom(BSgenome.Hsapiens.UCSC.hg19, BSgenome.Hsapiens.UCSC.hg19)
> importFrom(BSgenome.Hsapiens.UCSC.hg38, BSgenome.Hsapiens.UCSC.hg38)
> and there should be no more 'R CMD check' warning.
> Then you need to use the long name in your code to refer to the object.
> Hope this help,
> H.

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