[Bioc-devel] problem with git / svn transition: ssh keys

[Turaga, Nitesh]

What name did you store your key under? “id_rsa” or something else?

Nitesh

> On Sep 12, 2017, at 12:11 PM, Luo Weijun <luo_weijun at yahoo.com> wrote:
> 
> the following the are commands I used and output:
> 
> luo$ git clone git at git.bioconductor.org:packages/pathview
> Cloning into 'pathview'...
> key_load_public: invalid format
> Permission denied (publickey).
> fatal: Could not read from remote repository.
> 
> Please make sure you have the correct access rights
> and the repository exists.
> luo$  ssh -T git at git.bioconductor.org
> key_load_public: invalid format
> Permission denied (publickey).
> 
> Is it because the ssh key is still not in the right format because the suffix " luo_weijun at yahoo.com" was removed as I mentioned in previous email?
> 
> BTW, my ssh key should be associated with gage package too.
> 
> --------------------------------------------
> On Tue, 9/12/17, Turaga, Nitesh <Nitesh.Turaga at RoswellPark.org> wrote:
> 
> Subject: Re: problem with git / svn transition: ssh keys
> To: "Luo Weijun" <luo_weijun at yahoo.com>
> Cc: "Morgan, Martin" <Martin.Morgan at RoswellPark.org>, "Bioc-devel" <bioc-devel at r-project.org>
> Date: Tuesday, September 12, 2017, 11:47 AM
> 
> Your key is in our system. It
> starts with,
> 
> ssh-rsa
> AAAAB3NzaC1yc2EAAAADAQABAAACAQD4+kbkP7J0rkIGy81r9fO+4tCgHzQXfkthRu/MFPE7AMvZy7SeNf9WuxPQtMeOjAl
> 
> It is associated with the
> correct package “pathview” and also “gageData”. 
> 
> Please give me more
> information to help you. Show me the exact commands you are
> running. 
> 
> i.e 
> 
>     git clone git at git.bioconductor.org:packages/pathview
> 
> If that doesn’t work,
> then,
> 
>     ssh -T git at git.bioconductor.org
> 
> 
> Check out put for
> “pathview” package. Please also send the email to
> Bioc-devel. 
> 
> Best,
> 
> Nitesh
> 
> 
>> On Sep 12, 2017, at 11:39
> AM, Luo Weijun <luo_weijun at yahoo.com>
> wrote:
>> 
>> Nitesh,
>> I resubmit my ssh public key based on your
> suggestion last Friday. But I still cannot git clone my
> package respository. The same error remain as below. Can you
> check into this?
>> Weijun
>> 
>> Cloning into
> 'pathview'...
>> key_load_public:
> invalid format
>> Permission denied
> (publickey).
>> fatal: Could not read from
> remote repository.
>> 
>> Please make sure you have the correct
> access rights
>> and the repository
> exists.
>> 
>> 
> --------------------------------------------
>> On Fri, 9/8/17, Luo Weijun <luo_weijun at yahoo.com>
> wrote:
>> 
>> Subject:
> Re: problem with git / svn transition: ssh keys
>> To: "NiteshTuraga" <Nitesh.Turaga at RoswellPark.org>
>> Cc: "MartinMorgan" <Martin.Morgan at RoswellPark.org>
>> Date: Friday, September 8, 2017, 12:23
> PM
>> 
>> Nitesh,
>> I just submitted it. The problem is
>> gone indeed.
>> Could
> you process my request and assign
>> me
> the git access? Thanks.
>> Weijun
>> 
>> 
> --------------------------------------------
>> On Fri, 9/8/17, Turaga, Nitesh <Nitesh.Turaga at RoswellPark.org>
>> wrote:
>> 
>>   Subject: Re: problem with git / svn
>> transition: ssh keys
>>   To: "Luo Weijun" <luo_weijun at yahoo.com>
>>   Cc: "Morgan, Martin" <Martin.Morgan at RoswellPark.org>
>>   Date: Friday, September 8, 2017,
> 10:31
>> AM
>> 
>>   Hi Weijun,
>> 
>>   I understand this was a problem
>> earlier on our
>>   end,
> and it has been fixed. 
>> 
>>   Is it still the case that it gives
>> the
>>   “Github ID
> cannot contain spaces”
>> error? If so,
> can you
>>   take a screen shot and send
> it to me.
>> I’ve tried it a few
>>   times and it does not give me that
>> error anymore.
>> 
>>   Nitesh 
>> 
>> 
>>> On Sep 8, 2017,
> at 10:22
>>   AM, Luo Weijun <luo_weijun at yahoo.com>
>>   wrote:
>>> 
>>> Nitesh,
>>> As I
> mentioned previously, I
>> tried to
>>   submit with the prefix ssh-rsa, but
> it
>> always complained
>>   that “Github ID cannot contain
>> spaces” since there is a
>>   space following ssh-rsa. I guess it
>> will allow me submit if
>>   I remove the empty space, but would
>> that be a functional ssh
>>   key?
>>> BTW, the
> web form error“Github
>>   ID cannot
> contain spaces” seem to
>> wrong as this
> is ssh key
>>   submission.
>>> Weijun
>>> 
>> 
>>> 
>> 
>> 
> --------------------------------------------
>>> On Thu, 9/7/17, Turaga, Nitesh
>> <Nitesh.Turaga at RoswellPark.org>
>>   wrote:
>>> 
>>> Subject:
>>   Re:
> problem with git / svn transition:
>> ssh
> keys
>>> To: "Luo Weijun"
> <luo_weijun at yahoo.com>
>>> Cc: "Morgan, Martin" <Martin.Morgan at RoswellPark.org>
>>> Date: Thursday, September 7,
>> 2017, 5:20
>>   PM
>>> 
>>> Hi Luo,
>>> 
>>> The key we
> have on
>>   file is missing the
> starting
>>> `ssh-rsa`.
>>   Could you please resubmit? 
>>> 
>>> Best,
>>> 
>>> Nitesh
>>> 
>>> 
>>>> 
>>> On Sep
> 7, 2017, at 5:04 PM, Luo
>> Weijun
>>   <luo_weijun at yahoo.com>
>>> wrote:
>>>> 
> 
>>>> Just want
>>> to make
>>   sure
> that you see my email below. I
>> still
> have the
>>> same problem at this
> time.
>>>> Weijun
>>>> 
>>>> 
>>> 
>> 
>> 
> --------------------------------------------
>>>> On Wed, 9/6/17, Luo Weijun
>> <luo_weijun at yahoo.com>
>>> wrote:
>>>> 
> 
>>>> Subject:
>>> problem
>>   with
> git / svn transition: ssh keys
>>>> 
> 
>>   To: "NiteshTuraga" <Nitesh.Turaga at RoswellPark.org>
>>>> Cc: "Martin Morgan"
> <martin.morgan at roswellpark.org>
>>>> Date: Wednesday, September 6,
>> 2017,
>>   11:32
>>> AM
>>>> 
>>>> Dear
>>> 
> Nitesh,
>>>> I submitted my ssh
> keys
>>> online
>>>> yesterday.
>>  
> However, I still
>>> cannot git clone
> my
>>   packages
>>>> from
>>> 
>>   github. Could you help me? Thanks!
>>>> 
>>   The
>>> error message below see to
>>>> complained
>>> the
>>   public key
> format. My ssh public key
>> looks
>>>> like: 
>>>> 
>>   ssh-rsa
>>> AAAAB3NzaC1y….FHQ== luo_weijun at yahoo.com
>>>> but the google web form
>> always
>>>> 
> complained “Github ID
>> cannot
>>   contain
>>> 
> spaces”. So I
>>>> removed the
> prefix and
>>> suffix parts:
> "ssh-rsa " and
>>   " luo_weijun at yahoo.com".
>>>> it got through after that. 
>>>> Weijun
>>>> 
>>>> 
>>>> $ git clone
>>  
> git at git.bioconductor.org:packages/pathview
>>>> Cloning into
> 'pathview'...
>>>> 
> key_load_public: invalid
>> format
>>>> Permission denied
>> (publickey).
>>>> 
> fatal: Could not read from
>> remote
>>>> repository.
>>>> 
>> 
>>>> Please make sure you have
>> the
>>   correct
>>>> access rights
>>>> and the
>>> 
> 
>>   repository exists.
>>> 
>>> 
>>> 
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