[Bioc-devel] push access to bioconductor repository-reg.

[Turaga, Nitesh]

Hi Shweta,

I’m cc-ing bioc-devel on this as well. There are other members of the team in the future who could possibly help you with your questions. 

You seem to have three public keys on our

find . -name "shwetagopaul92.pub" -exec cat {} \;          

ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQDRU2oyo0iT2qVP3d8ciLYMbpPjkoVyS06AdJDvEcV7MUqHaTTRtz6TEIoVchQPskYn7D3c+UDxYty8pOXQ5M7gETRhbeewuEabSHV77jmzdgXj3AizE77bffAz3KA98Ibz1up+z065/qHMR8hZUpm3hw1kAVMyeiOvk2bRrowcJoewP7KtArgMTNBaecFLcV2xmOncHGBlC2FM7svwwRxa0zfhiMtV0RRlb9totAl+A/WrdVoHkHpPl96Jm9yvHN4FoZyD0acaXpQiKVEamhyANegZ/J+2pNan9JkMiqTF8Rdh/e6LHLBwxd3mpnMkJOOIYwexixWHUZtuAeNot53P

ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQCfQ+7dozCd9jrQ+nPnzfAAa9Nf4KjfDP1oXSFc8hHE+0UZZHxqSdubzZvrfJaNUT95Z2Uey17GRy4OYtd4ven2qTY3wWNI4Vgpjs/olqNqHQLyIF/uIe2LsiLwUzFh/rQQiOfHJkLvOcOU1CqiuAfqqHLPK4lP1X8vrnnMhA7oEAaJGBbIOEDlcCyJfFc8IY05UJsoxut61APZ4SowiVyhWfLYoQKh8R5OeQOj0h0ARTbkQvHIWE20ZUY0XPpz5Bm9kmjtavwhkTcrapKFJ527PTiPYjgWQwqVvkBus9JJv+zodkdumMNdDEuji498pDWsCNy7TH5BG10pr18AJel5

ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQDCSq5kTCW4ObxX83RAwgi7eQRpWxMsOQxRdVooWRa+5NygGLA7OkLBkqgF8b5zdfQ+vSBGHgSDRFnINqAd313wQ/V9f2VoCNXxo/FGhkpc6nrdtVUTCHL2rtihY/KZNS1V6/16b6GWmsUE2yux8PRxYtbnK5TMNFAGkt4s2eBJYH8FEGVLYk0De4K+mQDDlXvKPDgGvoUYHVlCKXijvvLN4RnUw4FtGles8fa8XBEtZz574kYqUWo5RhwNgCiRVysKhpp/FUs3RqYRZCwDhnLOdvbQYCBAz7efcMAjuXheVwXAYWdh8wpZcGyftimvZy380UgWnoZuER1Hl9rWUDip


Again, it’s all about using the correct private key. Look into http://bioconductor.org/developers/how-to/git/faq/ , specifically #15 to set up your config file to access the correct private key.

Best,

Nitesh 


> On Oct 26, 2017, at 11:04 AM, Shweta Gopaulakrishnan <reshg at channing.harvard.edu> wrote:
> 
> Hi Nitesh, 
> 
> I updated my public key on github yesterday. I have also submitted the google form with the new public key to bioconductor. I am still not having the permission to fetch contents from the Bioconductor repository. 
> Please could you let me know the public key you have on your database now?
> 
> Thank you! 
> 
> On Wed, Oct 25, 2017 at 12:15 PM, Shweta Gopaulakrishnan <reshg at channing.harvard.edu> wrote:
> Hi Nitesh,
> 
> Thank you for your response. 
> I did have a private key corresponding to a different public key. I have updated github and Bioconductor with the new public key. 
> 
> Thank you! 
> 
> On Wed, Oct 25, 2017 at 9:49 AM, Turaga, Nitesh <Nitesh.Turaga at roswellpark.org> wrote:
> Hi Vincent,
> 
> 
> The RELEASE_3_6 branch does not exist yet, it is still called “master”. You may push your changes there. You can see all the available branches by trying
> 
>         `git branch -a`
> 
> We will notify bioc-devel once the new branch is created, towards end of the month.
> 
> Shweta, has access to restfulSE and restfulSEData, with the public key
> 
> ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQDRU2oyo0iT2qVP3d8ciLYMbpPjkoVyS06AdJDvEcV7MUqHaTTRtz6TEIoVchQPskYn7D3c+UDxYty8pOXQ5M7gETRhbeewuEabSHV77jmzdgXj3AizE77bffAz3KA98Ibz1up+z065/qHMR8hZUpm3hw1kAVMyeiOvk2bRrowcJoewP7KtArgMTNBaecFLcV2xmOncHGBlC2FM7svwwRxa0zfhiMtV0RRlb9totAl+A/WrdVoHkHpPl96Jm9yvHN4FoZyD0acaXpQiKVEamhyANegZ/J+2pNan9JkMiqTF8Rdh/e6LHLBwxd3mpnMkJOOIYwexixWHUZtuAeNot53P
> 
> It is important that Shweta use the private key, which corresponds to that public key. This often happens when people change computers, or delete/overwrite the keys in their `~/.ssh` folder.
> 
> Best,
> 
> Nitesh
> 
> 
> > On Oct 25, 2017, at 5:56 AM, Vincent Carey <stvjc at channing.harvard.edu> wrote:
> >
> > Hi Nitesh -- could you have a look at this?  I think since the submission process was successful
> > Shweta's key must be known to the system.
> >
> > For my own parody package I wanted to try to push a change to current 3.6 build system but found
> >
> >  * [new branch]      RELEASE_3_4  -> upstream/RELEASE_3_4
> >
> >  * [new branch]      RELEASE_3_5  -> upstream/RELEASE_3_5
> >
> >  * [new branch]      master       -> upstream/master
> >
> > %vjcair> git checkout -b RELEASE_3_5 upstream/RELEASE_3_5
> >
> > Branch RELEASE_3_5 set up to track remote branch RELEASE_3_5 from upstream.
> >
> > Switched to a new branch 'RELEASE_3_5'
> >
> > %vjcair> git checkout -b RELEASE_3_6 upstream/RELEASE_3_6
> >
> > fatal: 'upstream/RELEASE_3_6' is not a commit and a branch 'RELEASE_3_6' cannot be created from it
> >
> > %vjcair> git branch
> >
> > * RELEASE_3_5
> >
> >   master
> >
> >
> >
> >
> > ---------- Forwarded message ----------
> > From: Shweta Gopaulakrishnan <reshg at channing.harvard.edu>
> > Date: Tue, Oct 24, 2017 at 5:17 PM
> > Subject: push access to bioconductor repository-reg.
> > To: Vincent Carey <stvjc at channing.harvard.edu>
> >
> >
> > Hi Dr.Carey,
> >
> > restfulSE an rhdf5client build and install OK now. They are failing tests, cause the changes on github are not reflected on the package build.
> >
> > The steps are to push into the bioconductor restfulSE repository by adding it as a remote to the local repository. When I try fetching the contents of the bioconductor repo [ git fetch upstream ] , it says permission denied. I have added my SSH keys to my github and submitted my github id using Bioconductor's google form.
> > Am I missing something ?
> >
> > I am following this link :
> > https://bioconductor.org/developers/how-to/git/new-package-workflow/
> >
> > Thank you !
> > --
> > Shweta Gopaulakrishnan,
> > Bioinformatician,
> > Channing Division of Network Medicine,
> > Brigham and Women's Health Hospital,
> > Boston,MA 02115
> >
> 
> 
> 
> This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.
> 
> 
> 
> -- 
> Shweta Gopaulakrishnan,
> Bioinformatician,
> Channing Division of Network Medicine,
> Brigham and Women's Health Hospital,
> Boston,MA 02115
> 
> 
> 
> -- 
> Shweta Gopaulakrishnan,
> Bioinformatician,
> Channing Division of Network Medicine,
> Brigham and Women's Health Hospital,
> Boston,MA 02115



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