[Bioc-devel] Coverage badge

Andrzej Oleś andrzej.oles at gmail.com
Sat Nov 25 12:26:20 CET 2017

Hi Lluís,

thanks for your inquiry. The work on restoring the coverage badges is
ongoing. As you pointed it out, due to the deprecation of the GitHub mirror
we cannot use the previous approach based on codecov anymore. Nevertheless,
the badges will be reintroduced soon. They will contain an up-to-date
coverage status as reported by daily runs of covr R package. However, they
won't be linked against the detailed reports on codecov as this is
unfortunately technically not possible in the current setup.


On Sat, Nov 25, 2017 at 11:57 AM, Lluís Revilla <lluis.revilla at gmail.com>

> Hi all,
> Since Bioconductor has moved to git, packages don't have the coverage
> badge. This was supposed to have been corrected some weeks ago (
> https://stat.ethz.ch/pipermail/bioc-devel/2017-October/012142.html).
> However it wasn't
> It seems that badge relied on Github mirror to calculate the coverage using
> codecov (As explained here:
> https://stat.ethz.ch/pipermail/bioc-devel/2017-March/010643.html). As the
> Github mirror is no longer updated, this process is now unfeasable.
> One option would be to calculate the coverage of the packages in the daily
> builds using covr and provide that information as part of the build checks.
> Will be possible to have the coverage badge back in the current
> implementation?
> Many thanks,
> Lluís
> PS: When will be the Bioconductor mirror in Github deleted?
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