[Bioc-devel] EXTERNAL: Re: Rnits Bioconductor package

Dipen Sangurdekar dipen.sangurdekar at gmail.com
Wed Nov 8 19:44:32 CET 2017


Great, it worked!

Thank you very much. I will monitor the build issues.

Dipen

On Wed, Nov 8, 2017 at 1:43 PM, Turaga, Nitesh <
Nitesh.Turaga at roswellpark.org> wrote:

> I’ve added your correct submission.
>
> Please try again
>
> > On Nov 8, 2017, at 1:41 PM, Ramos Perez, Marcel <Marcel.RamosPerez at RoswellPark.org>
> wrote:
> >
> > Hi Dipen,
> > Please make sure that your GitHub and Subversion usernames were entered
> correctly in the form.
> >
> > I have copied Nitesh, as he can verify that they are valid and assist
> you further.
> >
> >
> > Regards,
> >
> > Marcel
> >
> >
> > On 11/08/2017 01:33 PM, Dipen Sangurdekar wrote:
> >> Hi Marcel,
> >>
> >> I have been trying to push my local git repos to git.bioconductor.org.
> I have added my public ssh key to bioconductor google form twice already,
> but I still get the following error
> >>
> >> $ git remote -v
> >>
> >> upstream git at git.bioconductor.org:packages/Rnits (fetch)
> >>
> >> upstream git at git.bioconductor.org:packages/Rnits (push)
> >>
> >>
> >>
> >> $ git push upstream master
> >>
> >> FATAL: W any packages/Rnits dipenps DENIED by fallthru
> >>
> >> (or you mis-spelled the reponame)
> >>
> >> fatal: Could not read from remote repository.
> >>
> >>
> >>
> >> Please make sure you have the correct access rights
> >>
> >> and the repository exists.
> >>
> >>
> >>
> >> Is there any avenue I can pursue to follow up on this issue? I couldn't
> find any help by looking on the bioconductor site.
> >>
> >>
> >>
> >> Thanks,
> >>
> >> Dipen
> >>
> >>
> >>
> >>
> >> On Sun, Oct 1, 2017 at 9:14 PM, Marcel Ramos <marcel.ramosperez@
> roswellpark.org> wrote:
> >> Hi Dipen,
> >> The most recent build does not reflect your changes.
> >> http://bioconductor.org/checkResults/devel/bioc-LATEST/Rnits/
> >> Please commit your changes to Bioconductor's git repository.
> >> For instructions, please see: https://bioconductor.org/
> developers/how-to/git/
> >>
> >> Best regards,
> >>
> >> Marcel
> >>
> >> On 09/27/2017 04:02 PM, Dipen Sangurdekar wrote:
> >>> Thanks - I have pushed changes to version 1.11 (second link) on
> github. Is the build on dev version done nightly?
> >>> I need to find where I uploaded the code for version 1.10.0 (first
> link). The bug is because the link to the GEO file the code uses in the
> vignette doesn't exist on NCBI's site anymore.
> >>>
> >>> Dipen
> >>>
> >>>
> >>>
> >>> On Wed, Sep 27, 2017 at 3:28 PM, Marcel Ramos <Marcel.RamosPerez@
> roswellpark.org> wrote:
> >>> Hi Dipen P. Sangurdekar,
> >>> I am contacting you concerning the `Rnits` package, on the release
> and/or development
> >>> branch of Bioconductor, for which you are listed as the maintainer.
> >>> The latest build/check report shows that your package is failing on
> one or more platforms.
> >>> Please resolve the issues for your package's continued inclusion in
> Bioconductor.
> >>> http://bioconductor.org/checkResults/release/bioc-LATEST/Rnits/
> >>> http://bioconductor.org/checkResults/devel/bioc-LATEST/Rnits/
> >>>
> >>> Please let me know if you have any questions.
> >>> Regards,
> >>>
> >>> Marcel
> >>>
> >>>
> >>> --
> >>> Marcel Ramos
> >>> Bioconductor Core Team
> >>> Roswell Park Cancer Institute
> >>> Department of Biostatistics & Bioinformatics
> >>>
> >>>
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> >>
> >>
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> >
>
>
>
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