[Bioc-devel] Can't reproduce build error from OS X server for pwOmics package

Hervé Pagès hpages at fredhutch.org
Wed Nov 1 16:49:37 CET 2017


Hi Maren,

pwOmics/vignettes/ contains a pwOmics.bcf file which is
likely to be contamination (looks like an intermediate biber
file). It's never a good idea to put this kind of intermediate
file in git. Please remove and let's see if that solves the problem.

Cheers,
H.

On 11/01/2017 12:33 AM, Sitte, Maren wrote:
> Dear Bioconductor developers,
>
> I can't reproduce the error from the OS X server which is
>
> /usr/local/bin/texi2dvi: biber failed
>
>
>
> for the pwOmics build report.
> Do you have any advice for me, how to fix this?
>
> Additionally, I wan't to point out that the maintenance changed and that I'm the
> new maintainer for the pwOmics package.
>
> Kind regards,
> Maren Sitte
> --
> University Medical Center Göttingen
> Institute of Medical Statistics
> Humboldtallee 32
> 37073 Göttingen
> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.ams.med.uni-2Dgoettingen.de&d=DwIGaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=ujz3ALv3DsR47gfGDApsFZkTzCVs4uM-t4X1R5oBv68&s=g088n_cubhteMfPpcrSWTm0PLqClbJtT0OnZScT57oM&e=
> E-Mail: maren.sitte at med.uni-goettingen.de<mailto:maren.sitte at med.uni-goettingen.de>
> Phone: +49 (0) 551-39-10710
>
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-- 
Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M1-B514
P.O. Box 19024
Seattle, WA 98109-1024

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