[Bioc-devel] parallel processing in R?

[Martin Morgan]

On 12/11/2017 12:19 PM, Dwivedi, Bhakti wrote:
> Hi,
> 
> 
> Is there a way to parallelize ConsensusClusterPlus package?

Consider https://bioconductor.org/packages/BiocParallel

> 
> 
> https://bioconductor.org/packages/release/bioc/html/ConsensusClusterPlus.html
> 
> 
> We are developing a R shiny tool that performs consensus clustering in addition to other genome-wide analyses. The consensus clustering step is taking the longest.
> 
> 
> Can I do parallel processing in R/R shiny? What parallel package (if any) I can implement in the R code to do parallel computing?
> 
> 
> Appreciate your help.  Thank you.
> 
> 
> Regards,
> 
> Bhakti
> 
> 
> 
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