[Bioc-devel] last check fails on windows server with not reproducible error

Shepherd, Lori Lori.Shepherd at RoswellPark.org
Mon Dec 11 13:30:51 CET 2017

Please ignore windows missing dependency ERRORs,  as mentioned before, this is do to CRAN package binaries not being available yet.


If the package is building without ERROR on linux and mac you can ignore the windows ERROR.

Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Sitte, Maren <Maren.Sitte at med.uni-goettingen.de>
Sent: Monday, December 11, 2017 7:23:43 AM
To: bioc-devel
Subject: [Bioc-devel] last check fails on windows server with not reproducible error

Dear all,

According to the last check, the developer version of the package
pwOmics just fails at the windows server with the following message:

install for i386

ERROR: dependencies 'rBiopaxParser', 'igraph', 'STRINGdb', 'biomaRt' are not available for package 'pwOmics'
* removing 'C:/Users/biocbuild/bbs-3.7-bioc/meat/pwOmics.buildbin-libdir/pwOmics'

I can't adress this error by myself.
Has anyone an advice for me, how to handle this?

Thank you for all your suggestions.
Maren Sitte

University Medical Center Göttingen
Institute of Medical Statistics
Humboldtallee 32
37073 Göttingen
E-Mail: maren.sitte at med.uni-goettingen.de<mailto:maren.sitte at med.uni-goettingen.de>
Phone: +49 (0) 551-39-10710

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