[Bioc-devel] error with transfering SVN repo to git

Kevin RUE kevinrue67 at gmail.com
Tue Aug 15 09:56:45 CEST 2017


Hi Samuel,

Please see the recent email below from Nitesh (core team) yesterday on this
mailing list.

Best wishes,
Kevin


Hi Maintainers,
> The beta phase for the GIT transition has now come to an end. All access
> to the git.bioconductor.org server has been suspended till August 16th
> 6pm EST.
> Please see the important dates, and times for the transition below.
> Best,
> Nitesh

> On Aug 7, 2017, at 4:43 PM, Turaga, Nitesh <Nitesh.Turaga at RoswellPark.org>
> wrote:
> >
> > Hello Maintainers,
> >
> >
> > The details and timeline of the transition from SVN to GIT have been
> finalized.
> >
> >
> > 1.  Important Dates, Days of transition - August 15th and August 16th.
> >
> > August 15th - 9am EST
> >
> >       - Git BETA server commits stop, BETA phase ends. All commits to
> the BETA repository are discarded.
> >       - Data experiment package SVN commits are stopped.
> >
> > August 16th - 9am EST
> >
> >       - Software package SVN commits are stopped,
> >       - About 6 hours after, the GIT server comes to life.
> >       - No SVN commits here after
> >
> > August 16th - 6pm EST onwards.
> >
> >       - Only commits to git.bioconductor.org possible.
> >       - See scenarios on how to commit to the new git server.
> >
> >       (https://github.com/Bioconductor/bioc_git_
> transition/tree/master/doc)
> >
> > 2. For access to git.bioconductor.org, please submit your SSH keys to
> >
> >       https://goo.gl/forms/eg36vcBkIUjfZfLe2
> >
> > This is important, without which you will not be able to maintain your
> package.
> >
> > 3. Workflow packages will remain on SVN for the moment. We will inform
> you when the transition of the workflow packages happen.
> >
> >
> >
> > Best,
> >
> >
> > Nitesh Turaga
> > Bioconductor Core Team


On Tue, Aug 15, 2017 at 5:44 AM, Samuel E Zimmerman <
sezimmer at einstein.yu.edu> wrote:

> Hi,
>
> I am following the first scenario to change over from SVN to github. When
> I do the following commands
>
>
> git remote add upstream git at git.bioconductor.org:packages/pathVar.git
> git fetch upstream
>
> I get the error
>
> Permission denied (publickey).
> fatal: Could not read from remote repository.
>
> Please make sure you have the correct access rights
> and the repository exists.
>
> Alternatively, if I re-clone the empty repository and then do the command
>
> git remote add upstream https://git.bioconductor.org/packages/pathVar.git
> git fetch upstream
>
> I get the error
>
> fatal: remote error: FATAL: R any packages/pathVar nobody DENIED by
> fallthru
> (or you mis-spelled the reponame)
>
> Do you know why this is happening?
>
> Thank you very much.
>
> Best,
> Sam Zimmerman
>
>         [[alternative HTML version deleted]]
>
> _______________________________________________
> Bioc-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel
>

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